Dyella japonica A8

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Rhodanobacteraceae

Genus

Dyella

Description

Dyella japonica A8 is a Gram-negative bacterium characterized by its rod shape. It possesses a single replicon, which is indicative of its genetic structure and replication capabilities. The strain is cataloged under the accession number NZ_CP008884.1, signifying its inclusion in genetic databases for further reference and study. As a member of the Dyella genus, D. japonica A8 contributes to the diverse ecological roles that such bacteria play in various environments. Gram-negative bacteria are often involved in nutrient cycling and can be significant in soil and aquatic ecosystems. Their cell wall structure, which includes an outer membrane, can also influence their interactions with other microorganisms and their resistance to certain antibiotics. The ecological implications of D. japonica A8 may include participation in the degradation of organic materials and potential roles in biogeochemical processes. Understanding the traits and genetic makeup of this bacterium can provide insights into its ecological functions and interactions within its habitat. This knowledge is crucial for appreciating the role of microbial diversity in maintaining ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyRhodanobacteraceae
GenusDyella
SpeciesDyella japonica
StrainA8

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Dyella japonica A8 chromosome, complete genome.

Gene Summary

Adenine Count

845241 bp

Thymine Count

847252 bp

Guanine Count

1569669 bp

Cytosine Count

1569021 bp

Genome Length

4831185 bp

Protein-coding Genes

4115 genes

Non-Coding Genes

55 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yeih family proteinHY57_RS07390Not AvailableNegative1808807 - 180983235612.8
lysr family transcriptional regulatorHY57_RS07395Not AvailablePositive1809920 - 181079831722.5
phosphoenolpyruvate--protein phosphotransferaseHY57_RS07400Not AvailableNegative1810911 - 181264163217.6
hpr family phosphocarrier proteinHY57_RS07405Not AvailableNegative1812797 - 18130669495.68
pts sugar transporter subunit iiaHY57_RS07410Not AvailableNegative1813059 - 181345113758.9
rnase adapter rapzHY57_RS07415Not AvailableNegative1813495 - 181439133426.1
hpr(ser) kinase/phosphataseHY57_RS07420Not AvailableNegative1814395 - 181534535510.2
ribosome hibernation-promoting factor, hpf/yfia familyHY57_RS07425Not AvailableNegative1815476 - 181579912266.8
rna polymerase factor sigma-54HY57_RS07430Not AvailableNegative1816088 - 181756954482.9
lps export abc transporter atp-binding proteinHY57_RS07435Not AvailableNegative1817695 - 181841426640.4

Displaying genes 1501 – 1510 of 4170 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.