Burkholderia cepacia strain DDS 7H-2

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain DDS 7H-2 is a Gram-negative bacterium commonly found in the rhizosphere, which is the region of soil influenced by plant roots. This microbe is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. Notably, B. cepacia strain DDS 7H-2 possesses three replicons, which may contribute to its genetic diversity and adaptability. This strain is known to have significant interactions with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion). In humans, B. cepacia can be associated with serious health effects, including pneumonia, infective endocarditis, and native valve endocarditis. These conditions underscore the potential pathogenicity of this bacterium, particularly in immunocompromised individuals. The presence of B. cepacia in the rhizosphere suggests that it may play a role in plant-microbe interactions, potentially influencing plant health and soil ecology. However, its pathogenic potential in humans highlights the dual nature of this organism, serving both as a beneficial soil inhabitant and a potential threat to human health. The balance between these roles could provide insights into microbial interactions in ecosystems and the implications for plant health and disease management. Accessions for this strain include NZ_CP007785.1, NZ_CP007786.1, and NZ_CP007787.1, which may facilitate further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain DDS 7H-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain DDS 7H-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain DDS 7H-2 chromosome 1, complete

Gene Summary

Adenine Count

621107 bp

Thymine Count

621250 bp

Guanine Count

1255081 bp

Cytosine Count

1262791 bp

Genome Length

3760231 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
coa pyrophosphataseDM42_RS23065Not AvailableNegative839597 - 84028325080.1
50s ribosomal protein l19DM42_RS23070Not AvailableNegative840371 - 84076314515.6
trna (guanosine(37)-n1)-methyltransferase trmdDM42_RS23075Not AvailableNegative840897 - 84169129348.1
ribosome maturation factor rimmDM42_RS23080Not AvailableNegative841693 - 84237024454.8
30s ribosomal protein s16DM42_RS23085Not AvailableNegative842413 - 8426679475.47
pqq-dependent sugar dehydrogenaseDM42_RS23090Not AvailablePositive842820 - 84395941197.4
nine proteinDM42_RS23095Not AvailablePositive844071 - 84453816865.6
pa0069 family radical sam proteinDM42_RS23100Not AvailableNegative844590 - 84576843732.4
lrp/asnc ligand binding domain-containing proteinDM42_RS23105Not AvailableNegative845859 - 84634718387.7
d-amino acid dehydrogenaseDM42_RS23110Not AvailablePositive846494 - 84778046020.6

Displaying genes 891 – 900 of 7498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total