Burkholderia cepacia strain DDS 7H-2

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain DDS 7H-2 is a Gram-negative bacterium commonly found in the rhizosphere, which is the region of soil influenced by plant roots. This microbe is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. Notably, B. cepacia strain DDS 7H-2 possesses three replicons, which may contribute to its genetic diversity and adaptability. This strain is known to have significant interactions with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion). In humans, B. cepacia can be associated with serious health effects, including pneumonia, infective endocarditis, and native valve endocarditis. These conditions underscore the potential pathogenicity of this bacterium, particularly in immunocompromised individuals. The presence of B. cepacia in the rhizosphere suggests that it may play a role in plant-microbe interactions, potentially influencing plant health and soil ecology. However, its pathogenic potential in humans highlights the dual nature of this organism, serving both as a beneficial soil inhabitant and a potential threat to human health. The balance between these roles could provide insights into microbial interactions in ecosystems and the implications for plant health and disease management. Accessions for this strain include NZ_CP007785.1, NZ_CP007786.1, and NZ_CP007787.1, which may facilitate further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain DDS 7H-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain DDS 7H-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain DDS 7H-2 chromosome 1, complete

Gene Summary

Adenine Count

621107 bp

Thymine Count

621250 bp

Guanine Count

1255081 bp

Cytosine Count

1262791 bp

Genome Length

3760231 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nicotinate phosphoribosyltransferaseDM42_RS22925Not AvailableNegative813814 - 81501346078.6
ferredoxin fdxaDM42_RS22930Not AvailablePositive815283 - 81560611992.0
Trna-asnNot AvailableNot AvailablePositive815709 - 815784Not Available
Trna-asnNot AvailableNot AvailablePositive815857 - 815932Not Available
crea family proteinDM42_RS22945Not AvailablePositive816060 - 81654517481.1
arac family transcriptional regulatorDM42_RS22950Not AvailablePositive816566 - 81747132759.8
azlc family abc transporter permeaseDM42_RS22955Not AvailablePositive817599 - 81836627038.2
azld domain-containing proteinDM42_RS22960Not AvailablePositive818363 - 81870112039.3
duf4088 family proteinDM42_RS22965Not AvailablePositive818862 - 81964429146.0
hypothetical proteinDM42_RS22970Not AvailableNegative819780 - 82018112094.8

Displaying genes 861 – 870 of 7498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total