Burkholderia cepacia strain DDS 7H-2

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cepacia strain DDS 7H-2 is a Gram-negative bacterium commonly found in the rhizosphere, which is the region of soil influenced by plant roots. This microbe is classified as a microaerophile, indicating that it requires reduced levels of oxygen for optimal growth. Notably, B. cepacia strain DDS 7H-2 possesses three replicons, which may contribute to its genetic diversity and adaptability. This strain is known to have significant interactions with various hosts, including Homo sapiens (humans), Viridiplantae (plants), Anura (frogs), and Allium cepa (onion). In humans, B. cepacia can be associated with serious health effects, including pneumonia, infective endocarditis, and native valve endocarditis. These conditions underscore the potential pathogenicity of this bacterium, particularly in immunocompromised individuals. The presence of B. cepacia in the rhizosphere suggests that it may play a role in plant-microbe interactions, potentially influencing plant health and soil ecology. However, its pathogenic potential in humans highlights the dual nature of this organism, serving both as a beneficial soil inhabitant and a potential threat to human health. The balance between these roles could provide insights into microbial interactions in ecosystems and the implications for plant health and disease management. Accessions for this strain include NZ_CP007785.1, NZ_CP007786.1, and NZ_CP007787.1, which may facilitate further research into its genetic and functional characteristics.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cepacia
Strainstrain DDS 7H-2

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Burkholderia cepacia strain DDS 7H-2
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Homo sapiens, Viridiplantae, Anura
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia cepacia strain DDS 7H-2 chromosome 1, complete

Gene Summary

Adenine Count

621107 bp

Thymine Count

621250 bp

Guanine Count

1255081 bp

Cytosine Count

1262791 bp

Genome Length

3760231 bp

Protein-coding Genes

3367 genes

Non-Coding Genes

185 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxal phosphate-dependent aminotransferaseDM42_RS33395Not AvailableNegative3055831 - 305700342846.2
putative toxin-antitoxin system toxin component, pin familyDM42_RS33400Not AvailableNegative3057037 - 305753417802.4
peroxide stress protein yaaaDM42_RS33405Not AvailablePositive3057592 - 305837429095.7
m14-type cytosolic carboxypeptidaseDM42_RS33410Not AvailablePositive3058514 - 305966842927.4
bspc domain-containing proteinDM42_RS33415Not AvailableNegative3059756 - 306041223322.9
energy-coupling factor abc transporter permeaseDM42_RS33420Not AvailableNegative3060555 - 306122923664.5
response regulator transcription factorDM42_RS33425Not AvailableNegative3061306 - 306214230574.2
duf2863 family proteinDM42_RS33430Not AvailableNegative3062358 - 306357544594.8
16s ribosomal rnaNot AvailableNot AvailablePositive3064145 - 3065677Not Available
Trna-ileNot AvailableNot AvailablePositive3065741 - 3065817Not Available

Displaying genes 2921 – 2930 of 7498 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infective endocarditisCausesPMC3112426
Native valve endocarditisCausesPMC3112426
PneumoniaCausesPMC9294674

Displaying health effects 1 – 3 of 3 in total