Burkholderia cenocepacia strain DDS 22E-1

Gram-negativeRodMotileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia cenocepacia strain DDS 22E-1 is a Gram-negative bacterium characterized by its rod shape and mobility, facilitated by the presence of flagella. This strain exhibits facultative aerobe behavior, allowing it to thrive in various oxygen conditions. It is mesophilic, indicating that it prefers moderate temperature ranges for optimal growth. The genomic structure of Burkholderia cenocepacia DDS 22E-1 is notable for containing three replicons, which may contribute to its genetic adaptability and versatility. The bacterium possesses two membranes, a characteristic feature of Gram-negative organisms, which plays a role in its interactions with the environment and potential hosts, including Homo sapiens. Burkholderia cenocepacia strain DDS 22E-1 is classified as nonsporulating and has a free-living biotic relationship, allowing it to exist independently in various habitats. This ecological flexibility suggests that it can thrive in diverse environments, potentially impacting both natural ecosystems and human health. The presence of this strain in human hosts raises concerns regarding its pathogenicity, particularly in immunocompromised individuals, given its association with respiratory infections and other health complications. The strain's adaptability and survival strategies highlight the need for ongoing research to understand its ecological roles and implications in clinical settings. Accessions for this strain include NZ_CP007782.1, NZ_CP007783.1, and NZ_CP007784.1, which provide resources for further genomic studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia cenocepacia
Strainstrain DDS 22E-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Burkholderia cenocepacia strain DDS 22E-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Caenorhabditis elegans
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Burkholderia cenocepacia strain DDS 22E-1 chromosome 2, complete

Gene Summary

Adenine Count

533698 bp

Thymine Count

532313 bp

Guanine Count

1071552 bp

Cytosine Count

1072061 bp

Genome Length

3209624 bp

Protein-coding Genes

2877 genes

Non-Coding Genes

8 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system atpase sctnDM39_RS32905Not AvailablePositive2667906 - 266928249073.0
hypothetical proteinDM39_RS32910Not AvailablePositive2669275 - 266996423925.7
type iii secretion system export apparatus subunit scttDM39_RS32915Not AvailablePositive2669958 - 267076728363.6
escu/yscu/hrcu family type iii secretion system export apparatus switch proteinDM39_RS32920Not AvailablePositive2670796 - 267182737296.9
asparagine synthase (glutamine-hydrolyzing)DM39_RS32925Not AvailablePositive2672047 - 267401772645.9
lytic transglycosylase domain-containing proteinDM39_RS32930Not AvailableNegative2674032 - 267482627671.9
type iii secretion system export apparatus subunit sctrDM39_RS32935Not AvailableNegative2674823 - 267549723956.1
type iii secretion system cytoplasmic ring protein sctqDM39_RS32940Not AvailableNegative2675501 - 267665239978.8
winged helix-turn-helix domain-containing proteinDM39_RS32945Not AvailableNegative2677022 - 267742015130.4
xanthine dehydrogenase family protein molybdopterin-binding subunitDM39_RS32950Not AvailableNegative2677896 - 268010677619.6

Displaying genes 2401 – 2410 of 7264 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.