Pseudomonas putida strain DLL-E4

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain DLL-E4 is a Gram-negative, rod-shaped bacterium that exists as single cells and demonstrates facultative anaerobic metabolism, allowing it to thrive in various oxygen conditions. This nonsporulating microbe is classified as a heterotroph, deriving its energy from organic compounds, and is predominantly found in soil and wastewater environments. Due to its metabolic versatility, Pseudomonas putida strain DLL-E4 is well-adapted to nutrient-rich habitats often associated with organic waste. Its ability to utilize a wide range of substrates enhances its potential for bioremediation applications, where it may play a role in degrading environmental pollutants. The strain's presence in wastewater suggests a capacity for contributing to the microbial dynamics essential for nutrient cycling and organic matter decomposition in such ecosystems. The adaptability of Pseudomonas putida strain DLL-E4 to varying oxygen levels is particularly noteworthy, as it enables the organism to occupy niches where oxygen availability fluctuates, further supporting its ecological role in soil and wastewater systems. This trait may facilitate its interactions with other microbial communities, potentially influencing biodegradation processes and nutrient availability in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain DLL-E4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain DLL-E4
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain DLL-E4


Gene Summary

Adenine Count

1216533 bp

Thymine Count

1217334 bp

Guanine Count

2024861 bp

Cytosine Count

2025334 bp

Genome Length

6484062 bp

Protein-coding Genes

5770 genes

Non-Coding Genes

313 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
AttlNot AvailableNot Available+1638195 - 1638206Not Available
Peptidase m23DW66_RS07545Not Available+1643569 - 164442629888.6
Rna polymerase sigma factorDW66_RS07550Not Available+1644535 - 164554238191.7
ferredoxin fdxaDW66_RS07555Not Available-1646159 - 164648212036.1
Putative mismatch repair proteinDW66_RS07560Not Available-1646623 - 164919695162.8
Putative integraseDW66_RS07565Not Available-1649247 - 165022436633.8
duf4224 domain-containing proteinDW66_RS07570Not Available-1650237 - 16504317180.89
hypothetical proteinDW66_RS07575Not Available-1650470 - 165082913065.2
hypothetical proteinDW66_RS07580Not Available-1651006 - 16511947065.46
Hypothetical proteinDW66_RS07585Not Available-1651191 - 165158614102.7

Displaying genes 1 – 10 of 6083 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites