Stenotrophomonas rhizophila strain DSM 14405

Gram-negativeRodMotileAnaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Lysobacterales

Family

Lysobacteraceae

Genus

Stenotrophomonas

Description

Stenotrophomonas rhizophila strain DSM 14405 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is classified as a chemoheterotroph, indicating that it derives energy from organic compounds. It is an anaerobic organism, thriving in environments without oxygen. Stenotrophomonas rhizophila is mesophilic, which means it prefers moderate temperature ranges for growth. The strain has a singular replicon, suggesting a simpler genomic structure compared to other more complex bacteria. Notably, it is nonsporulating, meaning it does not form spores as a means of survival under unfavorable conditions. The diverse habitat of Stenotrophomonas rhizophila indicates its adaptability to various environmental conditions, although specifics about these habitats are not provided. This adaptability can facilitate its role in different ecological contexts, potentially contributing to nutrient cycling or interactions with plant roots, given its identification as a rhizophilic organism. In summary, Stenotrophomonas rhizophila strain DSM 14405 demonstrates unique traits relevant to its ecological roles, particularly its anaerobic metabolism and flexibility in diverse habitats. These characteristics may enable it to play significant roles in soil microbiomes and plant health, although further research would be required to elucidate its specific ecological contributions. The accession number for this strain is NZ_CP007597.1.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderLysobacterales
FamilyLysobacteraceae
GenusStenotrophomonas
SpeciesStenotrophomonas rhizophila
Strainstrain DSM 14405

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Stenotrophomonas rhizophila strain DSM 14405
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Stenotrophomonas rhizophila strain DSM 14405 chromosome.

Gene Summary

Adenine Count

760950 bp

Thymine Count

758401 bp

Guanine Count

1564874 bp

Cytosine Count

1562203 bp

Genome Length

4648976 bp

Protein-coding Genes

4014 genes

Non-Coding Genes

80 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit cDX03_RS06180Not AvailablePositive1476309 - 147706127981.8
nadh-quinone oxidoreductase subunit dDX03_RS06185Not AvailablePositive1477151 - 147838046446.2
nadh-quinone oxidoreductase subunit nuoeDX03_RS06190Not AvailablePositive1478475 - 147900219458.2
nadh-quinone oxidoreductase subunit nuofDX03_RS06195Not AvailablePositive1479006 - 148034648401.8
nadh-quinone oxidoreductase subunit nuogDX03_RS06200Not AvailablePositive1480343 - 148259579081.7
nadh-quinone oxidoreductase subunit nuohDX03_RS06205Not AvailablePositive1482592 - 148368340473.6
nadh-quinone oxidoreductase subunit nuoiDX03_RS06210Not AvailablePositive1483687 - 148417518741.8
nadh-quinone oxidoreductase subunit jDX03_RS06215Not AvailablePositive1484182 - 148484123875.9
nadh-quinone oxidoreductase subunit nuokDX03_RS06220Not AvailablePositive1484838 - 148514310878.8
nadh-quinone oxidoreductase subunit lDX03_RS06225Not AvailablePositive1485151 - 148735580289.5

Displaying genes 1261 – 1270 of 4094 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.