Stutzerimonas decontaminans strain 19SMN4

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Stutzerimonas

Description

Stutzerimonas decontaminans strain 19SMN4 is a Gram-negative, mesophilic bacterium characterized by its rod shape and single-cell arrangement. This strain is heterotrophic, indicating that it derives its energy from organic compounds. It is an aerobic organism, requiring oxygen for growth and metabolism, and is noted for its lack of mobility despite possessing flagella. Strain 19SMN4 is classified as having two membranes, a trait common among Gram-negative bacteria, which contributes to its structural integrity and interaction with the environment. It is free-living, suggesting that it can exist independently of other organisms, which may facilitate its role in various ecological niches. The strain is associated with host environments, indicating potential interactions with host organisms, although specific host relationships are not detailed. Its single replicon suggests a streamlined genomic structure, which is typical for many environmental bacteria, allowing for efficient replication and adaptation. The accessions for this strain are documented under NZ_CP007509.1, providing a reference for further studies and potential applications. The ecological significance of Stutzerimonas decontaminans strain 19SMN4 may relate to its ability to decontaminate environments, as suggested by its name. Its heterotrophic nature and aerobic metabolism could play a role in nutrient cycling and the degradation of organic pollutants in its habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusStutzerimonas
SpeciesStutzerimonas decontaminans
Strainstrain 19SMN4

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Stutzerimonas decontaminans strain 19SMN4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityNot Available

Genome Summary

Stutzerimonas decontaminans strain 19SMN4 chromosome, complete

Gene Summary

Adenine Count

887273 bp

Thymine Count

892085 bp

Guanine Count

1473713 bp

Cytosine Count

1472591 bp

Genome Length

4725662 bp

Protein-coding Genes

4291 genes

Non-Coding Genes

126 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
outer membrane protein assembly factor bameUIB01_RS16810Not AvailablePositive3634684 - 363519918861.6
rnfh family proteinUIB01_RS16815Not AvailableNegative3635241 - 363556711654.0
type ii toxin-antitoxin system rata family toxinUIB01_RS16820Not AvailableNegative3635560 - 363599415981.2
ssra-binding protein smpbUIB01_RS16825Not AvailablePositive3636202 - 363668418130.2
gntr family transcriptional regulatorUIB01_RS16830Not AvailableNegative3636756 - 363754129240.0
l-lactate permeaseUIB01_RS16835Not AvailablePositive3637809 - 363950359036.0
(fe-s)-binding proteinUIB01_RS16840Not AvailablePositive3639753 - 364057430068.9
lutb/lldf family l-lactate oxidation iron-sulfur proteinUIB01_RS16845Not AvailablePositive3640571 - 364203154289.5
lactate utilization proteinUIB01_RS16850Not AvailablePositive3642028 - 364269924676.7
fad-binding and (fe-s)-binding domain-containing proteinUIB01_RS16855Not AvailablePositive3642696 - 3645548104164.0

Displaying genes 3411 – 3420 of 4417 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm00005275-oxopentanoateC5H7O3Chemical structure of 5-oxopentanoateNot available
Average115.109Da
Monoisotopic115.040067665Da
BASm0001086scyllo-inososeC6H10O6Chemical structure of scyllo-inososeNot available
Average178.14Da
Monoisotopic178.0477381Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm00045922-hydroxybutanoateC4H7O3Chemical structure of 2-hydroxybutanoateNot available
Average103.098Da
Monoisotopic103.0400677Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.