Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ACN002 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1205852 bp
Thymine Count
1200558 bp
Guanine Count
1235727 bp
Cytosine Count
1237794 bp
Genome Length
4879931 bp
Protein-coding Genes
4411 genes
Non-Coding Genes
340 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyl-coa transferase | ACN002_RS12540 | A7ZPI2 | Negative | 2560631 - 2561881 | 45830.7 |
| yfdx family protein | ACN002_RS12545 | P76520 | Negative | 2562394 - 2563026 | 22907.4 |
| colanic acid biosynthesis lipoprotein ypdi | ACN002_RS12550 | O32528 | Positive | 2563322 - 2563597 | 10210.5 |
| yfdy family protein | ACN002_RS12560 | P76521 | Negative | 2563674 - 2563916 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | ACN002_RS12565 | P0ACV2 | Positive | 2564269 - 2565189 | 35495.5 |
| membrane protein ypdk | ACN002_RS26210 | Not Available | Positive | 2565545 - 2565616 | 2704.57 |
| alanine transaminase | ACN002_RS12570 | P77434 | Negative | 2565681 - 2566919 | 46218.8 |
| two-component system sensor histidine kinase ypda | ACN002_RS12575 | P0AA94 | Positive | 2567296 - 2568993 | 62661.3 |
| two-component system response regulator ypdb | ACN002_RS12580 | P0AE40 | Positive | 2569008 - 2569742 | 28722.6 |
| arac family transcriptional regulator | ACN002_RS12585 | P77396 | Positive | 2569755 - 2570612 | 32416.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





