Peptoclostridium acidaminophilum DSM 3953 strain al-2

curved/spiral

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptoclostridiaceae

Genus

Peptoclostridium

Description

Peptoclostridium acidaminophilum DSM 3953 strain al-2 is a Gram-positive bacterium characterized by its curved or spiral shape. Unlike some other members of the Clostridia class, this strain is non-spore-forming, which may influence its survival and ecological niche compared to spore-forming relatives. The strain possesses two replicons, indicating a unique genomic structure that may play a role in its metabolic versatility and adaptation to various environments. The strain is cataloged under the accessions NZ_CP007452.1 and NZ_CP007453.1, which are important for genomic studies and understanding its genetic composition. The traits of Peptoclostridium acidaminophilum DSM 3953 strain al-2 suggest potential applications in microbiology and biotechnology, particularly in processes involving amino acid metabolism, given its naming convention. From a biological perspective, the non-spore-forming nature of this bacterium may limit its resilience under extreme environmental conditions compared to spore-forming bacteria, which can endure unfavorable conditions for extended periods. This trait implies that Peptoclostridium acidaminophilum DSM 3953 strain al-2 may thrive in more stable, nutrient-rich environments where rapid growth and metabolic activities can occur. Understanding the ecological role of this strain could provide insights into its contributions to the microbial community dynamics and nutrient cycling in specific habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptoclostridiaceae
GenusPeptoclostridium
SpeciesPeptoclostridium acidaminophilum
StrainDSM 3953 strain al-2

Profile

Physiology
Gram staining propertiesGram-positive
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptoclostridium acidaminophilum DSM 3953 strain al-2 chromosome,

Gene Summary

Adenine Count

635733 bp

Thymine Count

621128 bp

Guanine Count

502449 bp

Cytosine Count

486952 bp

Genome Length

2246262 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

238 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseEAL2_RS04315Not AvailablePositive869009 - 86976427502.0
abc transporter substrate-binding proteinEAL2_RS04320Not AvailablePositive869807 - 87080536862.5
abc transporter atp-binding proteinEAL2_RS04325Not AvailablePositive870826 - 87155728146.3
tatd family hydrolaseEAL2_RS04330Not AvailablePositive871635 - 87238728251.7
tetr/acrr family transcriptional regulatorEAL2_RS04335Not AvailablePositive872460 - 87305323078.9
duf503 domain-containing proteinEAL2_RS04340Not AvailablePositive873044 - 87332510850.0
endonuclease iiiEAL2_RS04345Not AvailablePositive873331 - 87396323564.7
vanw family proteinEAL2_RS04350Not AvailablePositive873960 - 87532449562.3
duf2225 domain-containing proteinEAL2_RS04355Not AvailablePositive875345 - 87604327118.4
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlEAL2_RS04360Not AvailablePositive876069 - 87653917805.5

Displaying genes 981 – 990 of 2152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002182tungstateO4WChemical structure of tungstateNot available
Average247.84Da
Monoisotopic247.931687Da
BASm0008132(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphateC10H12N5O14P3Chemical structure of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphateNot available
Average519.15Da
Monoisotopic518.9615554Da
BASm0017645Cyclic pyranopterin monophosphateC10H14N5O8PChemical structure of Cyclic pyranopterin monophosphateNULL
Average363.2206Da
Monoisotopic363.057998961Da
BASm0018512molybdenum cofactorC10H18MoN5O8PS2Chemical structure of molybdenum cofactor73508-07-3
Average527.32Da
Monoisotopic528.938848315Da
BASm0034737(6S)-5,6,7,8-tetrahydrofolic acidC19H23N7O6Chemical structure of (6S)-5,6,7,8-tetrahydrofolic acidNULL
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.