Peptoclostridium acidaminophilum DSM 3953 strain al-2

curved/spiral

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Peptoclostridiaceae

Genus

Peptoclostridium

Description

Peptoclostridium acidaminophilum DSM 3953 strain al-2 is a Gram-positive bacterium characterized by its curved or spiral shape. Unlike some other members of the Clostridia class, this strain is non-spore-forming, which may influence its survival and ecological niche compared to spore-forming relatives. The strain possesses two replicons, indicating a unique genomic structure that may play a role in its metabolic versatility and adaptation to various environments. The strain is cataloged under the accessions NZ_CP007452.1 and NZ_CP007453.1, which are important for genomic studies and understanding its genetic composition. The traits of Peptoclostridium acidaminophilum DSM 3953 strain al-2 suggest potential applications in microbiology and biotechnology, particularly in processes involving amino acid metabolism, given its naming convention. From a biological perspective, the non-spore-forming nature of this bacterium may limit its resilience under extreme environmental conditions compared to spore-forming bacteria, which can endure unfavorable conditions for extended periods. This trait implies that Peptoclostridium acidaminophilum DSM 3953 strain al-2 may thrive in more stable, nutrient-rich environments where rapid growth and metabolic activities can occur. Understanding the ecological role of this strain could provide insights into its contributions to the microbial community dynamics and nutrient cycling in specific habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyPeptoclostridiaceae
GenusPeptoclostridium
SpeciesPeptoclostridium acidaminophilum
StrainDSM 3953 strain al-2

Profile

Physiology
Gram staining propertiesGram-positive
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Peptoclostridium acidaminophilum DSM 3953 strain al-2 chromosome,

Gene Summary

Adenine Count

635733 bp

Thymine Count

621128 bp

Guanine Count

502449 bp

Cytosine Count

486952 bp

Genome Length

2246262 bp

Protein-coding Genes

2007 genes

Non-Coding Genes

238 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ig-like domain-containing proteinEAL2_RS05605Not AvailablePositive1126074 - 112700031793.0
Hypothetical proteinEAL2_RS05610Not AvailablePositive1127012 - 112793232053.4
Rhodanese-related sulfurtransferaseEAL2_RS05615Not AvailablePositive1127949 - 112832314001.3
hypothetical proteinEAL2_RS15485Not AvailablePositive1128335 - 11285026389.68
stalk domain-containing proteinEAL2_RS15710Not AvailablePositive1128545 - 112942332234.6
HolinEAL2_RS05625Not AvailablePositive1129440 - 112971510316.5
N-acetylmuramoyl-l-alanine amidaseEAL2_RS05630Not AvailablePositive1129729 - 113015115690.7
AttrNot AvailableNot AvailablePositive1133213 - 1133231Not Available
AttlNot AvailableNot AvailablePositive1948918 - 1948946Not Available
Site-specific recombinaseEAL2_RS14855Not AvailableNegative1957513 - 1961229144278.0

Displaying genes 181 – 190 of 2152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

7 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0002182tungstateO4WChemical structure of tungstateNot available
Average247.84Da
Monoisotopic247.931687Da
BASm0008132(8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphateC10H12N5O14P3Chemical structure of (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphateNot available
Average519.15Da
Monoisotopic518.9615554Da
BASm0017645Cyclic pyranopterin monophosphateC10H14N5O8PChemical structure of Cyclic pyranopterin monophosphateNULL
Average363.2206Da
Monoisotopic363.057998961Da
BASm0018512molybdenum cofactorC10H18MoN5O8PS2Chemical structure of molybdenum cofactor73508-07-3
Average527.32Da
Monoisotopic528.938848315Da
BASm0034737(6S)-5,6,7,8-tetrahydrofolic acidC19H23N7O6Chemical structure of (6S)-5,6,7,8-tetrahydrofolic acidNULL
Average445.4292Da
Monoisotopic445.170981503Da

Displaying 1–7 of 7 metabolites

Health Effects

No health effects information available for this bacterium.