Campylobacter coli RM4661

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli RM4661 is a Gram-negative bacterium that exhibits microaerophilic growth requirements, meaning it thrives in environments with reduced oxygen levels. This organism is characterized by possessing two replicons, which are essential for its genetic stability and replication processes. The genomic data for C. coli RM4661 can be referenced through the GenBank accessions NZ_CP007181.1 and NZ_CP007182.1, which provide insights into its genetic makeup and potential functional capabilities. C. coli is commonly associated with gastrointestinal diseases in humans and is often found in various animal hosts, particularly in poultry. The microaerophilic nature of this bacterium suggests it may inhabit specific niches within the gastrointestinal tracts of its hosts, where oxygen levels are low but sufficient for its metabolic processes. This adaptation allows C. coli to compete effectively in these environments, potentially influencing its survival and transmission dynamics in both animal and human populations. Understanding the traits of C. coli RM4661 can provide valuable insights into its ecological role, particularly in food safety and public health contexts. The presence of this microaerophile in food products underscores the importance of monitoring and controlling Campylobacter species to prevent foodborne illnesses. This highlights the need for continued research into the biology and ecology of C. coli and related species to develop effective strategies for mitigating their impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
StrainRM4661

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli RM4661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete

Gene Summary

Adenine Count

18454 bp

Thymine Count

15111 bp

Guanine Count

7973 bp

Cytosine Count

6424 bp

Genome Length

47962 bp

Protein-coding Genes

55 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type i glutamate--ammonia ligaseYSS_RS03190Not AvailableNegative629579 - 63100953801.7
hypothetical proteinYSS_RS03195Not AvailablePositive631209 - 63191326559.2
peptidase u32 family proteinYSS_RS03200Not AvailablePositive631910 - 63316647287.6
5-(carboxyamino)imidazole ribonucleotide mutaseYSS_RS03205Not AvailablePositive633163 - 63365717473.5
duf3972 domain-containing proteinYSS_RS03210Not AvailablePositive633670 - 63422421075.0
glycine--trna ligase subunit alphaYSS_RS03215Not AvailablePositive634226 - 63508933144.2
nif3-like dinuclear metal center hexameric proteinYSS_RS03220Not AvailablePositive635076 - 63580127916.7
zinc ribbon domain-containing proteinYSS_RS03225Not AvailablePositive635811 - 63652727646.2
lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferaseYSS_RS03230Not AvailablePositive636524 - 63768145136.3
rlua family pseudouridine synthaseYSS_RS03235Not AvailablePositive637662 - 63841428696.4

Displaying genes 811 – 820 of 1996 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.