Campylobacter coli RM4661

Gram-negativeMicroaerophile

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Campylobacter coli RM4661 is a Gram-negative bacterium that exhibits microaerophilic growth requirements, meaning it thrives in environments with reduced oxygen levels. This organism is characterized by possessing two replicons, which are essential for its genetic stability and replication processes. The genomic data for C. coli RM4661 can be referenced through the GenBank accessions NZ_CP007181.1 and NZ_CP007182.1, which provide insights into its genetic makeup and potential functional capabilities. C. coli is commonly associated with gastrointestinal diseases in humans and is often found in various animal hosts, particularly in poultry. The microaerophilic nature of this bacterium suggests it may inhabit specific niches within the gastrointestinal tracts of its hosts, where oxygen levels are low but sufficient for its metabolic processes. This adaptation allows C. coli to compete effectively in these environments, potentially influencing its survival and transmission dynamics in both animal and human populations. Understanding the traits of C. coli RM4661 can provide valuable insights into its ecological role, particularly in food safety and public health contexts. The presence of this microaerophile in food products underscores the importance of monitoring and controlling Campylobacter species to prevent foodborne illnesses. This highlights the need for continued research into the biology and ecology of C. coli and related species to develop effective strategies for mitigating their impact on human health.

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter coli
StrainRM4661

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Campylobacter coli RM4661
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsMicroaerophile
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter coli RM4661 plasmid pRM4661_48kbp, complete

Gene Summary

Adenine Count

18454 bp

Thymine Count

15111 bp

Guanine Count

7973 bp

Cytosine Count

6424 bp

Genome Length

47962 bp

Protein-coding Genes

55 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar motor switch protein fligYSS_RS01355Not AvailablePositive266411 - 26743938415.4
flagellar assembly protein flihYSS_RS01360Not AvailablePositive267447 - 26827731178.3
1-deoxy-d-xylulose-5-phosphate synthaseYSS_RS01365Not AvailablePositive268270 - 27014769186.3
peroxide-responsive transcriptional repressor perrYSS_RS01370Not AvailablePositive270284 - 27069415934.4
hypothetical proteinYSS_RS01375Not AvailablePositive270740 - 27194248513.6
bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubieYSS_RS01380Not AvailablePositive271942 - 27264926764.7
tripartite tricarboxylate transporter permeaseYSS_RS01385Not AvailableNegative272646 - 27413953000.9
tripartite tricarboxylate transporter tctb family proteinYSS_RS01390Not AvailableNegative274153 - 27459616799.3
tripartite tricarboxylate transporter substrate binding proteinYSS_RS01395Not AvailableNegative274601 - 27556635390.8
exodeoxyribonuclease vii large subunitYSS_RS01400Not AvailablePositive275739 - 27690243516.1

Displaying genes 441 – 450 of 1996 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.