Gemmatirosa kalamazoonensis strain KBS708

Kingdom

Pseudomonadati

Phylum

Gemmatimonadota

Class

Gemmatimonadia

Order

Gemmatimonadales

Family

Gemmatimonadaceae

Genus

Gemmatirosa

Description

Gemmatirosa kalamazoonensis strain KBS708 is notable for its unique genomic structure, characterized by the presence of three replicons. This trait is significant as it may contribute to the organism's adaptability and survival in various environments. The strain is cataloged under three distinct accessions: NZ_CP007130.1, NZ_CP007128.1, and NZ_CP007129.1, each representing different segments of its genomic information. The presence of multiple replicons suggests a complex genomic architecture that may allow for enhanced metabolic flexibility and resilience against environmental stresses. Such flexibility is often observed in microorganisms that thrive in diverse ecological niches. The ability to possess multiple replicons may facilitate horizontal gene transfer, potentially enabling the strain to acquire new traits that can be advantageous in changing environments. Gemmatirosa kalamazoonensis, as a member of the broader microbial community, plays a role in various biogeochemical cycles. Its genomic characteristics could provide insights into its ecological functions, particularly in nutrient cycling and interactions within microbial consortia. Understanding the genomic framework of strain KBS708 may ultimately contribute to our knowledge of microbial ecology and the roles these organisms play in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumGemmatimonadota
ClassGemmatimonadia
OrderGemmatimonadales
FamilyGemmatimonadaceae
GenusGemmatirosa
SpeciesGemmatirosa kalamazoonensis
Strainstrain KBS708

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete

Gene Summary

Adenine Count

731386 bp

Thymine Count

726049 bp

Guanine Count

1924833 bp

Cytosine Count

1929259 bp

Genome Length

5311527 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycoside hydrolase family 127 proteinJ421_RS24375Not AvailablePositive302458 - 30507094811.8
susc/raga family tonb-linked outer membrane proteinJ421_RS24380Not AvailablePositive305194 - 308157107918.0
ragb/susd family nutrient uptake outer membrane proteinJ421_RS24385Not AvailablePositive308168 - 30978159619.3
tonb-dependent receptor plug domain-containing proteinJ421_RS24390Not AvailablePositive309893 - 31038416887.3
pqq-binding-like beta-propeller repeat proteinJ421_RS24395Not AvailablePositive310476 - 31197853678.2
tim-barrel domain-containing proteinJ421_RS24400Not AvailablePositive312011 - 31430284633.6
glycoside hydrolase family 127 proteinJ421_RS24405Not AvailablePositive314465 - 31693690125.9
dpp iv n-terminal domain-containing proteinJ421_RS24410Not AvailablePositive317123 - 31932180105.9
tim-barrel domain-containing proteinJ421_RS24415Not AvailablePositive319362 - 32161182079.8
oligogalacturonate lyase family proteinJ421_RS24420Not AvailableNegative321636 - 32288946980.4

Displaying genes 5691 – 5700 of 6412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.