Gemmatirosa kalamazoonensis strain KBS708

Kingdom

Pseudomonadati

Phylum

Gemmatimonadota

Class

Gemmatimonadia

Order

Gemmatimonadales

Family

Gemmatimonadaceae

Genus

Gemmatirosa

Description

Gemmatirosa kalamazoonensis strain KBS708 is notable for its unique genomic structure, characterized by the presence of three replicons. This trait is significant as it may contribute to the organism's adaptability and survival in various environments. The strain is cataloged under three distinct accessions: NZ_CP007130.1, NZ_CP007128.1, and NZ_CP007129.1, each representing different segments of its genomic information. The presence of multiple replicons suggests a complex genomic architecture that may allow for enhanced metabolic flexibility and resilience against environmental stresses. Such flexibility is often observed in microorganisms that thrive in diverse ecological niches. The ability to possess multiple replicons may facilitate horizontal gene transfer, potentially enabling the strain to acquire new traits that can be advantageous in changing environments. Gemmatirosa kalamazoonensis, as a member of the broader microbial community, plays a role in various biogeochemical cycles. Its genomic characteristics could provide insights into its ecological functions, particularly in nutrient cycling and interactions within microbial consortia. Understanding the genomic framework of strain KBS708 may ultimately contribute to our knowledge of microbial ecology and the roles these organisms play in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumGemmatimonadota
ClassGemmatimonadia
OrderGemmatimonadales
FamilyGemmatimonadaceae
GenusGemmatirosa
SpeciesGemmatirosa kalamazoonensis
Strainstrain KBS708

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete

Gene Summary

Adenine Count

731386 bp

Thymine Count

726049 bp

Guanine Count

1924833 bp

Cytosine Count

1929259 bp

Genome Length

5311527 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseJ421_RS23735Not AvailablePositive142605 - 14527794198.5
abc transporter permeaseJ421_RS23740Not AvailableNegative145550 - 14824995943.9
padr family transcriptional regulatorJ421_RS23745Not AvailableNegative148251 - 14860113483.3
glycosyl hydrolase family 95 catalytic domain-containing proteinJ421_RS23750Not AvailablePositive148722 - 15115487846.4
amidohydrolase family proteinJ421_RS23755Not AvailablePositive151309 - 15271551008.9
hypothetical proteinJ421_RS34090Not AvailableNegative152720 - 1529719274.2
glycoside hydrolase family 2 tim barrel-domain containing proteinJ421_RS23765Not AvailableNegative153237 - 156038103290.0
duf6510 family proteinJ421_RS23770Not AvailableNegative156186 - 1564649478.62
ferredoxin reductaseJ421_RS23775Not AvailableNegative156636 - 15740627803.2
molybdopterin-dependent oxidoreductaseJ421_RS23780Not AvailableNegative157396 - 15802223171.3

Displaying genes 5561 – 5570 of 6412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.