Gemmatirosa kalamazoonensis strain KBS708

Kingdom

Pseudomonadati

Phylum

Gemmatimonadota

Class

Gemmatimonadia

Order

Gemmatimonadales

Family

Gemmatimonadaceae

Genus

Gemmatirosa

Description

Gemmatirosa kalamazoonensis strain KBS708 is notable for its unique genomic structure, characterized by the presence of three replicons. This trait is significant as it may contribute to the organism's adaptability and survival in various environments. The strain is cataloged under three distinct accessions: NZ_CP007130.1, NZ_CP007128.1, and NZ_CP007129.1, each representing different segments of its genomic information. The presence of multiple replicons suggests a complex genomic architecture that may allow for enhanced metabolic flexibility and resilience against environmental stresses. Such flexibility is often observed in microorganisms that thrive in diverse ecological niches. The ability to possess multiple replicons may facilitate horizontal gene transfer, potentially enabling the strain to acquire new traits that can be advantageous in changing environments. Gemmatirosa kalamazoonensis, as a member of the broader microbial community, plays a role in various biogeochemical cycles. Its genomic characteristics could provide insights into its ecological functions, particularly in nutrient cycling and interactions within microbial consortia. Understanding the genomic framework of strain KBS708 may ultimately contribute to our knowledge of microbial ecology and the roles these organisms play in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumGemmatimonadota
ClassGemmatimonadia
OrderGemmatimonadales
FamilyGemmatimonadaceae
GenusGemmatirosa
SpeciesGemmatirosa kalamazoonensis
Strainstrain KBS708

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete

Gene Summary

Adenine Count

731386 bp

Thymine Count

726049 bp

Guanine Count

1924833 bp

Cytosine Count

1929259 bp

Genome Length

5311527 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar kinaseJ421_RS01880Not AvailableNegative417370 - 41841037689.5
bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolaseJ421_RS01885Not AvailableNegative418563 - 41921322505.2
tagaturonate reductaseJ421_RS01890Not AvailableNegative419258 - 42076654142.8
uxaa family hydrolaseJ421_RS01895Not AvailableNegative420763 - 42234655630.1
pvc-type heme-binding cxxch proteinJ421_RS01900Not AvailableNegative422339 - 425359107906.0
glucuronate isomeraseJ421_RS01905Not AvailableNegative425393 - 42681153257.2
rok family transcriptional regulatorJ421_RS01910Not AvailablePositive427183 - 42840343249.4
m28 family metallopeptidaseJ421_RS01915Not AvailablePositive428678 - 43014751256.7
thiamine pyrophosphate-requiring proteinJ421_RS01920Not AvailableNegative430224 - 43201163827.7
abc transporter permeaseJ421_RS01925Not AvailableNegative432176 - 43483693701.7

Displaying genes 341 – 350 of 6412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.