Gemmatirosa kalamazoonensis strain KBS708

Kingdom

Pseudomonadati

Phylum

Gemmatimonadota

Class

Gemmatimonadia

Order

Gemmatimonadales

Family

Gemmatimonadaceae

Genus

Gemmatirosa

Description

Gemmatirosa kalamazoonensis strain KBS708 is notable for its unique genomic structure, characterized by the presence of three replicons. This trait is significant as it may contribute to the organism's adaptability and survival in various environments. The strain is cataloged under three distinct accessions: NZ_CP007130.1, NZ_CP007128.1, and NZ_CP007129.1, each representing different segments of its genomic information. The presence of multiple replicons suggests a complex genomic architecture that may allow for enhanced metabolic flexibility and resilience against environmental stresses. Such flexibility is often observed in microorganisms that thrive in diverse ecological niches. The ability to possess multiple replicons may facilitate horizontal gene transfer, potentially enabling the strain to acquire new traits that can be advantageous in changing environments. Gemmatirosa kalamazoonensis, as a member of the broader microbial community, plays a role in various biogeochemical cycles. Its genomic characteristics could provide insights into its ecological functions, particularly in nutrient cycling and interactions within microbial consortia. Understanding the genomic framework of strain KBS708 may ultimately contribute to our knowledge of microbial ecology and the roles these organisms play in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumGemmatimonadota
ClassGemmatimonadia
OrderGemmatimonadales
FamilyGemmatimonadaceae
GenusGemmatirosa
SpeciesGemmatirosa kalamazoonensis
Strainstrain KBS708

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete

Gene Summary

Adenine Count

731386 bp

Thymine Count

726049 bp

Guanine Count

1924833 bp

Cytosine Count

1929259 bp

Genome Length

5311527 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rhamnogalacturonan acetylesteraseJ421_RS01780Not AvailablePositive389353 - 39011127505.7
tonb-dependent receptor plug domain-containing proteinJ421_RS01785Not AvailableNegative390119 - 39054414666.8
glycoside hydrolase family 26 proteinJ421_RS01790Not AvailableNegative390637 - 39176741798.1
ragb/susd family nutrient uptake outer membrane proteinJ421_RS01795Not AvailableNegative391775 - 39346361235.5
tonb-dependent receptorJ421_RS01800Not AvailableNegative393478 - 396663114020.0
rok family transcriptional regulatorJ421_RS01805Not AvailablePositive396931 - 39818444467.6
glycoside hydrolase family 9 proteinJ421_RS01810Not AvailablePositive398181 - 39993862484.6
eama family transporterJ421_RS01815Not AvailablePositive399948 - 40082930023.5
tim-barrel domain-containing proteinJ421_RS01820Not AvailablePositive400943 - 40333089312.4
apc family permeaseJ421_RS01825Not AvailablePositive403427 - 40501053586.5

Displaying genes 321 – 330 of 6412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.