Gemmatirosa kalamazoonensis strain KBS708

Kingdom

Pseudomonadati

Phylum

Gemmatimonadota

Class

Gemmatimonadia

Order

Gemmatimonadales

Family

Gemmatimonadaceae

Genus

Gemmatirosa

Description

Gemmatirosa kalamazoonensis strain KBS708 is notable for its unique genomic structure, characterized by the presence of three replicons. This trait is significant as it may contribute to the organism's adaptability and survival in various environments. The strain is cataloged under three distinct accessions: NZ_CP007130.1, NZ_CP007128.1, and NZ_CP007129.1, each representing different segments of its genomic information. The presence of multiple replicons suggests a complex genomic architecture that may allow for enhanced metabolic flexibility and resilience against environmental stresses. Such flexibility is often observed in microorganisms that thrive in diverse ecological niches. The ability to possess multiple replicons may facilitate horizontal gene transfer, potentially enabling the strain to acquire new traits that can be advantageous in changing environments. Gemmatirosa kalamazoonensis, as a member of the broader microbial community, plays a role in various biogeochemical cycles. Its genomic characteristics could provide insights into its ecological functions, particularly in nutrient cycling and interactions within microbial consortia. Understanding the genomic framework of strain KBS708 may ultimately contribute to our knowledge of microbial ecology and the roles these organisms play in their respective environments.

Taxonomy

KingdomPseudomonadati
PhylumGemmatimonadota
ClassGemmatimonadia
OrderGemmatimonadales
FamilyGemmatimonadaceae
GenusGemmatirosa
SpeciesGemmatirosa kalamazoonensis
Strainstrain KBS708

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gemmatirosa kalamazoonensis strain KBS708 chromosome, complete

Gene Summary

Adenine Count

731386 bp

Thymine Count

726049 bp

Guanine Count

1924833 bp

Cytosine Count

1929259 bp

Genome Length

5311527 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta hydrolaseJ421_RS08165Not AvailablePositive1852669 - 185344527930.0
rna polymerase sigma factorJ421_RS08170Not AvailablePositive1853660 - 185526158437.5
type ii toxin-antitoxin system phd/yefm family antitoxinJ421_RS08175Not AvailablePositive1855316 - 185566312763.3
type ii toxin-antitoxin system vapc family toxinJ421_RS08180Not AvailablePositive1855660 - 185604914637.7
vps10 domain-containing proteinJ421_RS08185Not AvailablePositive1856303 - 1859641121329.0
murein l,d-transpeptidase catalytic domain-containing proteinJ421_RS08190Not AvailableNegative1859746 - 186056428283.6
yip1 family proteinJ421_RS08195Not AvailableNegative1860795 - 186131017986.2
protein kinase domain-containing proteinJ421_RS08200Not AvailablePositive1861455 - 186286447946.4
rhodanese-like domain-containing proteinJ421_RS08205Not AvailablePositive1862959 - 186332413245.7
xanthine dehydrogenase family protein molybdopterin-binding subunitJ421_RS08210Not AvailableNegative1863420 - 186570580803.9

Displaying genes 1611 – 1620 of 6412 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.