Thermocrinis ruber strain DSM 23557

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Thermocrinis

Description

Thermocrinis ruber strain DSM 23557 is a thermophilic bacterium characterized by the presence of flagella, which facilitates motility in high-temperature environments. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in extreme conditions. The strain is cataloged under the accession NZ_CP007028.1, providing a reference for genomic analysis and further research. The presence of flagella is a significant trait as it may enhance the bacterium's ability to navigate its thermal habitat, which is often characterized by high temperatures and potentially limited nutrient availability. The single replicon could suggest a simpler genetic organization, which is often advantageous for survival in extreme conditions by reducing the energy required for replication and maintenance. Thermocrinis ruber strain DSM 23557 is likely to play a role in the microbial community of hot environments, such as hot springs, where thermophiles are crucial for nutrient cycling and biogeochemical processes. Their metabolic activities can contribute to the degradation of organic materials and the overall ecosystem functioning in these extreme habitats. Understanding the ecological role and capabilities of T. ruber can provide insights into microbial diversity and adaptation mechanisms in high-temperature environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusThermocrinis
SpeciesThermocrinis ruber
Strainstrain DSM 23557

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermocrinis ruber strain DSM 23557 chromosome, complete genome.

Gene Summary

Adenine Count

424478 bp

Thymine Count

409173 bp

Guanine Count

347565 bp

Cytosine Count

339821 bp

Genome Length

1521037 bp

Protein-coding Genes

1625 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1122 family proteinTHERU_RS01780Not AvailablePositive329286 - 32973818232.9
nil domain-containing proteinTHERU_RS01785Not AvailablePositive329746 - 3299889093.1
thiamine-phosphate kinaseTHERU_RS01790Not AvailablePositive329985 - 33090834097.1
sigma-54-dependent transcriptional regulatorTHERU_RS01795Not AvailablePositive330850 - 33220551882.0
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolaseTHERU_RS01800Not AvailablePositive332217 - 33373456565.2
phosphoribosylformylglycinamidine synthase iTHERU_RS01805Not AvailableNegative333724 - 33440725296.5
phosphoribosylformylglycinamidine synthase subunit pursTHERU_RS01810Not AvailableNegative334404 - 3346168072.89
duf3108 domain-containing proteinTHERU_RS01815Not AvailablePositive334639 - 33538228985.4
undecaprenyl-diphosphatase upppTHERU_RS01820Not AvailablePositive335382 - 33615228630.9
hypothetical proteinTHERU_RS08425Not AvailableNegative336114 - 33665320830.9

Displaying genes 361 – 370 of 1675 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.