Thermocrinis ruber strain DSM 23557

Kingdom

Pseudomonadati

Phylum

Aquificota

Class

Aquificia

Order

Aquificales

Family

Aquificaceae

Genus

Thermocrinis

Description

Thermocrinis ruber strain DSM 23557 is a thermophilic bacterium characterized by the presence of flagella, which facilitates motility in high-temperature environments. This strain has a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in extreme conditions. The strain is cataloged under the accession NZ_CP007028.1, providing a reference for genomic analysis and further research. The presence of flagella is a significant trait as it may enhance the bacterium's ability to navigate its thermal habitat, which is often characterized by high temperatures and potentially limited nutrient availability. The single replicon could suggest a simpler genetic organization, which is often advantageous for survival in extreme conditions by reducing the energy required for replication and maintenance. Thermocrinis ruber strain DSM 23557 is likely to play a role in the microbial community of hot environments, such as hot springs, where thermophiles are crucial for nutrient cycling and biogeochemical processes. Their metabolic activities can contribute to the degradation of organic materials and the overall ecosystem functioning in these extreme habitats. Understanding the ecological role and capabilities of T. ruber can provide insights into microbial diversity and adaptation mechanisms in high-temperature environments.

Taxonomy

KingdomPseudomonadati
PhylumAquificota
ClassAquificia
OrderAquificales
FamilyAquificaceae
GenusThermocrinis
SpeciesThermocrinis ruber
Strainstrain DSM 23557

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thermocrinis ruber strain DSM 23557 chromosome, complete genome.

Gene Summary

Adenine Count

424478 bp

Thymine Count

409173 bp

Guanine Count

347565 bp

Cytosine Count

339821 bp

Genome Length

1521037 bp

Protein-coding Genes

1625 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(fe-s)-binding proteinTHERU_RS01730Not AvailableNegative319556 - 32071943262.0
m16 family metallopeptidaseTHERU_RS01735Not AvailableNegative320771 - 32202447306.1
m16 family metallopeptidaseTHERU_RS01740Not AvailableNegative322021 - 32331350439.2
udp-glucuronic acid decarboxylase family proteinTHERU_RS01745Not AvailablePositive323379 - 32432035207.5
twin-arginine translocase tata/tate family subunitTHERU_RS01750Not AvailablePositive324326 - 3245297496.36
transcription antitermination factor nusbTHERU_RS01755Not AvailableNegative324526 - 32493015733.0
6,7-dimethyl-8-ribityllumazine synthaseTHERU_RS01760Not AvailableNegative324927 - 32539117125.9
pantoate--beta-alanine ligaseTHERU_RS01765Not AvailableNegative325378 - 32624132781.7
is200/is605 family accessory protein tnpb-related proteinTHERU_RS01770Not AvailablePositive326417 - 32797359553.8
histidine--trna ligaseTHERU_RS01775Not AvailablePositive328067 - 32929646848.2

Displaying genes 351 – 360 of 1675 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.