Comamonas testosteroni TK102

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas testosteroni TK102 is a Gram-negative, mesophilic bacterium characterized by its rod shape and the presence of flagella, although it is non-motile. This species requires oxygen for growth, classifying it as an aerobe. It possesses a single replicon and features a double membrane structure, typical of Gram-negative bacteria. C. testosteroni TK102 is categorized as free-living, indicating that it does not rely on a host organism for survival. Its habitat is diverse, which suggests adaptability to various environmental conditions. This flexibility in habitat preference may contribute to its ecological role, potentially influencing nutrient cycling and interactions within microbial communities. Notably, the organism does not engage in sporulation, which may impact its survival strategies under adverse conditions. The complete genome of C. testosteroni TK102 can be accessed under the accession number NZ_CP006704.1, providing a resource for further genomic and functional studies. In summary, Comamonas testosteroni TK102 exemplifies a versatile aerobe with specific morphological and physiological traits that facilitate its survival and ecological interactions in various habitats. Its non-motility and free-living nature highlight its role in the surrounding microbial ecosystem, potentially contributing to the degradation processes in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas testosteroni
StrainTK102

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Comamonas testosteroni TK102
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas testosteroni TK102 chromosome, complete genome.

Gene Summary

Adenine Count

1156103 bp

Thymine Count

1155467 bp

Guanine Count

1875653 bp

Cytosine Count

1875480 bp

Genome Length

6062703 bp

Protein-coding Genes

5416 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bug family tripartite tricarboxylate transporter substrate binding proteinO987_RS02800Not AvailablePositive615169 - 61614934237.7
alpha-hydroxy acid oxidaseO987_RS02805Not AvailablePositive616297 - 61753544776.9
pls/posa family non-ribosomal peptide synthetaseO987_RS02810Not AvailablePositive617841 - 621947147608.0
4'-phosphopantetheinyl transferase family proteinO987_RS27500Not AvailablePositive621947 - 62255821553.1
trap transporter large permeaseO987_RS02820Not AvailableNegative622633 - 62391945708.0
trap transporter small permeaseO987_RS02825Not AvailableNegative624346 - 62486118901.5
trap transporter substrate-binding proteinO987_RS02830Not AvailableNegative625063 - 62604935013.1
had-iib family hydrolaseO987_RS02835Not AvailableNegative626301 - 62710129190.7
peptide chain release factor 3O987_RS02840Not AvailableNegative627257 - 62888560276.1
mfs transporterO987_RS02845Not AvailablePositive629151 - 63042544565.3

Displaying genes 651 – 660 of 5598 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da
BASm00031644,5-dihydroxyphthalateC8H4O6Chemical structure of 4,5-dihydroxyphthalateNot available
Average196.115Da
Monoisotopic196.001885Da
BASm0003304cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateC8H6O6Chemical structure of cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateNot available
Average198.131Da
Monoisotopic198.0175351Da
BASm0010010(3Z)-2-oxo-4-carboxy-3-hexenedioateC7H3O7Chemical structure of (3Z)-2-oxo-4-carboxy-3-hexenedioateNot available
Average199.096Da
Monoisotopic198.9895232Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm00175154-Carboxy-4-hydroxy-2-oxoadipateC7H8O8Chemical structure of 4-Carboxy-4-hydroxy-2-oxoadipateNULL
Average220.1336Da
Monoisotopic220.021917232Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.