Comamonas testosteroni TK102

Gram-negativeRodNon-motileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Comamonas

Description

Comamonas testosteroni TK102 is a Gram-negative, mesophilic bacterium characterized by its rod shape and the presence of flagella, although it is non-motile. This species requires oxygen for growth, classifying it as an aerobe. It possesses a single replicon and features a double membrane structure, typical of Gram-negative bacteria. C. testosteroni TK102 is categorized as free-living, indicating that it does not rely on a host organism for survival. Its habitat is diverse, which suggests adaptability to various environmental conditions. This flexibility in habitat preference may contribute to its ecological role, potentially influencing nutrient cycling and interactions within microbial communities. Notably, the organism does not engage in sporulation, which may impact its survival strategies under adverse conditions. The complete genome of C. testosteroni TK102 can be accessed under the accession number NZ_CP006704.1, providing a resource for further genomic and functional studies. In summary, Comamonas testosteroni TK102 exemplifies a versatile aerobe with specific morphological and physiological traits that facilitate its survival and ecological interactions in various habitats. Its non-motility and free-living nature highlight its role in the surrounding microbial ecosystem, potentially contributing to the degradation processes in diverse environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusComamonas
SpeciesComamonas testosteroni
StrainTK102

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Comamonas testosteroni TK102
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Comamonas testosteroni TK102 chromosome, complete genome.

Gene Summary

Adenine Count

1156103 bp

Thymine Count

1155467 bp

Guanine Count

1875653 bp

Cytosine Count

1875480 bp

Genome Length

6062703 bp

Protein-coding Genes

5416 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
meta and duf4377 domain-containing proteinO987_RS18950Not AvailablePositive4192521 - 419335430635.4
moaf-related domain-containing proteinO987_RS18955Not AvailableNegative4193776 - 419412313101.4
mfs transporterO987_RS18960Not AvailablePositive4194468 - 419576345597.9
diaminopimelate dehydrogenaseO987_RS18965Not AvailableNegative4195865 - 419686035823.5
eama family transporter rardO987_RS18970Not AvailableNegative4196942 - 419783232258.5
pseudouridine synthaseO987_RS18975Not AvailablePositive4198033 - 419878528747.5
dhh family phosphoesteraseO987_RS18980Not AvailableNegative4198838 - 419985737635.8
m20 aminoacylase family proteinO987_RS18985Not AvailablePositive4200196 - 420139543067.3
putative bifunctional diguanylate cyclase/phosphodiesteraseO987_RS18990Not AvailableNegative4201457 - 420374285171.2
ribosome biogenesis gtpase ylqfO987_RS18995Not AvailableNegative4203902 - 420484935003.4

Displaying genes 3911 – 3920 of 5598 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001003phthalateC8H4O4Chemical structure of phthalateNot available
Average164.117Da
Monoisotopic164.0120558Da
BASm0001885Tetra-mu3-sulfido-tetrairon(1+)Fe4S4Chemical structure of Tetra-mu3-sulfido-tetrairon(1+)Not available
Average351.62Da
Monoisotopic351.62748Da
BASm00031644,5-dihydroxyphthalateC8H4O6Chemical structure of 4,5-dihydroxyphthalateNot available
Average196.115Da
Monoisotopic196.001885Da
BASm0003304cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateC8H6O6Chemical structure of cis-4,5-dihydroxycyclohexa-2,6-diene-1,2-dicarboxylateNot available
Average198.131Da
Monoisotopic198.0175351Da
BASm0010010(3Z)-2-oxo-4-carboxy-3-hexenedioateC7H3O7Chemical structure of (3Z)-2-oxo-4-carboxy-3-hexenedioateNot available
Average199.096Da
Monoisotopic198.9895232Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da
BASm0014038Malic acidC4H6O5Chemical structure of Malic acid97-67-6
Average134.0874Da
Monoisotopic134.021523302Da
BASm0014042Oxoglutaric acidC5H6O5Chemical structure of Oxoglutaric acid328-50-7
Average146.0981Da
Monoisotopic146.021523302Da
BASm0017263NADPC21H29N7O17P3Chemical structure of NADP53-59-8
Average744.4129Da
Monoisotopic744.083277073Da
BASm00175154-Carboxy-4-hydroxy-2-oxoadipateC7H8O8Chemical structure of 4-Carboxy-4-hydroxy-2-oxoadipateNULL
Average220.1336Da
Monoisotopic220.021917232Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.