Sodalis praecaptivus strain HS1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Sodalis

Description

Sodalis praecaptivus strain HS1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which may contribute to its motility. This strain is notable for possessing two replicons, indicating a complex genomic structure that could be advantageous for its adaptability in various environments. The strain is cataloged under the accessions NZ_CP006570.1 and NZ_CP006569.1, which provide a basis for further genetic and functional studies. The combination of its Gram-negative classification and rod shape suggests that Sodalis praecaptivus HS1 may share physiological traits common to many bacteria within the same classification. The presence of flagella indicates a potential for movement, which can be essential for colonization and survival in diverse habitats. The dual replicon structure hints at a level of genomic plasticity that might allow the bacterium to respond effectively to environmental changes or stresses. From a biological and ecological perspective, the traits of Sodalis praecaptivus strain HS1 suggest its potential role in microbial communities, where motility and adaptability are crucial for survival. Understanding the specific functions and interactions of this bacterium within its ecosystem could yield insights into its ecological significance and potential applications in biotechnology or microbiome studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusSodalis
SpeciesSodalis praecaptivus
Strainstrain HS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sodalis praecaptivus strain HS1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Phthiraptera
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sodalis praecaptivus strain HS1 chromosome, complete genome.

Gene Summary

Adenine Count

996753 bp

Thymine Count

1006024 bp

Guanine Count

1351907 bp

Cytosine Count

1354844 bp

Genome Length

4709528 bp

Protein-coding Genes

3954 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii secretion system needle filament subunit sctfSANT_RS16345Not AvailablePositive3661707 - 36619649516.15
type iii secretion system inner rod subunit sctiSANT_RS16350Not AvailablePositive3662016 - 366233911455.5
type iii secretion system inner membrane ring lipoprotein sctjSANT_RS16355Not AvailablePositive3662339 - 366311828337.4
type iii secretion apparatus protein orga/mxikSANT_RS16360Not AvailablePositive3663115 - 366370222107.9
hypothetical proteinSANT_RS16365Not AvailablePositive3663680 - 366434825479.4
hypothetical proteinSANT_RS16370Not AvailablePositive3664345 - 366472213510.8
lytic transglycosylase domain-containing proteinSANT_RS16375Not AvailablePositive3664778 - 366532320422.9
inositol phosphate phosphatase sopbSANT_RS16380Not AvailablePositive3665598 - 366743367092.8
type iii secretion system chaperoneSANT_RS16385Not AvailableNegative3667877 - 366822712772.2
inositol phosphate phosphatase sopbSANT_RS16390Not AvailableNegative3668227 - 367027275569.0

Displaying genes 3261 – 3270 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.