Sodalis praecaptivus strain HS1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Sodalis

Description

Sodalis praecaptivus strain HS1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which may contribute to its motility. This strain is notable for possessing two replicons, indicating a complex genomic structure that could be advantageous for its adaptability in various environments. The strain is cataloged under the accessions NZ_CP006570.1 and NZ_CP006569.1, which provide a basis for further genetic and functional studies. The combination of its Gram-negative classification and rod shape suggests that Sodalis praecaptivus HS1 may share physiological traits common to many bacteria within the same classification. The presence of flagella indicates a potential for movement, which can be essential for colonization and survival in diverse habitats. The dual replicon structure hints at a level of genomic plasticity that might allow the bacterium to respond effectively to environmental changes or stresses. From a biological and ecological perspective, the traits of Sodalis praecaptivus strain HS1 suggest its potential role in microbial communities, where motility and adaptability are crucial for survival. Understanding the specific functions and interactions of this bacterium within its ecosystem could yield insights into its ecological significance and potential applications in biotechnology or microbiome studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusSodalis
SpeciesSodalis praecaptivus
Strainstrain HS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sodalis praecaptivus strain HS1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Phthiraptera
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sodalis praecaptivus strain HS1 chromosome, complete genome.

Gene Summary

Adenine Count

996753 bp

Thymine Count

1006024 bp

Guanine Count

1351907 bp

Cytosine Count

1354844 bp

Genome Length

4709528 bp

Protein-coding Genes

3954 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
iron uptake transporter permease efeuSANT_RS07045Not AvailablePositive1585606 - 158643630073.4
iron uptake system protein efeoSANT_RS07050Not AvailablePositive1586477 - 158761641683.7
iron uptake transporter deferrochelatase/peroxidase subunitSANT_RS07055Not AvailablePositive1587630 - 158893747844.4
yejg family proteinSANT_RS07060Not AvailablePositive1589373 - 158972012647.3
microcin c abc transporter atp-binding protein yejfSANT_RS07065Not AvailableNegative1589865 - 159147558646.4
abc transporter permeaseSANT_RS07070Not AvailableNegative1591477 - 159250238390.1
microcin c abc transporter permease yejbSANT_RS07075Not AvailableNegative1592499 - 159359340292.8
extracellular solute-binding proteinSANT_RS07080Not AvailableNegative1593608 - 159541368651.6
sugar phosphate isomerase/epimerase family proteinSANT_RS07085Not AvailablePositive1595561 - 159638829945.7
bifunctional murein dd-endopeptidase/murein ld-carboxypeptidaseSANT_RS07090Not AvailableNegative1596939 - 159751421432.7

Displaying genes 1531 – 1540 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.