Sodalis praecaptivus strain HS1

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Bruguierivoracaceae

Genus

Sodalis

Description

Sodalis praecaptivus strain HS1 is a Gram-negative bacterium characterized by its rod shape and the presence of flagella, which may contribute to its motility. This strain is notable for possessing two replicons, indicating a complex genomic structure that could be advantageous for its adaptability in various environments. The strain is cataloged under the accessions NZ_CP006570.1 and NZ_CP006569.1, which provide a basis for further genetic and functional studies. The combination of its Gram-negative classification and rod shape suggests that Sodalis praecaptivus HS1 may share physiological traits common to many bacteria within the same classification. The presence of flagella indicates a potential for movement, which can be essential for colonization and survival in diverse habitats. The dual replicon structure hints at a level of genomic plasticity that might allow the bacterium to respond effectively to environmental changes or stresses. From a biological and ecological perspective, the traits of Sodalis praecaptivus strain HS1 suggest its potential role in microbial communities, where motility and adaptability are crucial for survival. Understanding the specific functions and interactions of this bacterium within its ecosystem could yield insights into its ecological significance and potential applications in biotechnology or microbiome studies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyBruguierivoracaceae
GenusSodalis
SpeciesSodalis praecaptivus
Strainstrain HS1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Sodalis praecaptivus strain HS1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Phthiraptera
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sodalis praecaptivus strain HS1 chromosome, complete genome.

Gene Summary

Adenine Count

996753 bp

Thymine Count

1006024 bp

Guanine Count

1351907 bp

Cytosine Count

1354844 bp

Genome Length

4709528 bp

Protein-coding Genes

3954 genes

Non-Coding Genes

209 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleotide exchange factor grpeSANT_RS05435Not AvailablePositive1217894 - 121848121961.0
uracil-dna glycosylaseSANT_RS05440Not AvailableNegative1218783 - 121946625043.3
autonomous glycyl radical cofactor grcaSANT_RS05445Not AvailablePositive1219785 - 122016814347.0
atp-dependent rna helicase srmbSANT_RS05450Not AvailableNegative1220737 - 122208049776.1
trna1(val) (adenine(37)-n6)-methyltransferaseSANT_RS05455Not AvailablePositive1222195 - 122293826744.3
lytic polysaccharide monooxygenase auxiliary activity family 9 proteinSANT_RS05460Not AvailablePositive1223446 - 122405122952.7
l-aspartate oxidaseSANT_RS05465Not AvailableNegative1224487 - 122608859236.7
rna polymerase sigma factor rpoeSANT_RS05470Not AvailablePositive1226503 - 122707821713.9
anti-sigma-e factor rseaSANT_RS05475Not AvailablePositive1227107 - 122780225565.1
sigma-e factor regulatory protein rsebSANT_RS05480Not AvailablePositive1227802 - 122875835540.6

Displaying genes 1211 – 1220 of 4542 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.