Synechococcus sp. KORDI-52 strain KORDI 52

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. KORDI-52 strain KORDI 52 is a Gram-negative cyanobacterium characterized by the presence of flagella, which may contribute to its motility. This strain has a single replicon, indicating a streamlined genomic organization that is typical for many cyanobacterial species. The genomic sequence of this strain is accessible under the accession number NZ_CP006271.1. Cyanobacteria, including Synechococcus sp. KORDI-52, are known for their photosynthetic capabilities and play a crucial role in aquatic ecosystems, contributing significantly to primary production and influencing nutrient cycling. The presence of flagella in this strain suggests an adaptation that may enhance its ability to navigate through varied aquatic environments, potentially aiding in the search for optimal light conditions and nutrient availability. Overall, the traits of Synechococcus sp. KORDI-52 highlight its adaptations as a freshwater cyanobacterium and its ecological importance in aquatic systems, where it can contribute to both the carbon and nitrogen cycles due to its photosynthetic and nitrogen-fixing abilities.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. KORDI-52
Strainstrain KORDI 52

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. KORDI-52 strain KORDI 52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. KORDI-52 strain KORDI 52 chromosome, complete

Gene Summary

Adenine Count

528371 bp

Thymine Count

523984 bp

Guanine Count

759146 bp

Cytosine Count

760568 bp

Genome Length

2572069 bp

Protein-coding Genes

2722 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdKR52_RS11210Not AvailableNegative2183196 - 218426037668.4
duf3122 domain-containing proteinKR52_RS11215Not AvailableNegative2184260 - 218474817869.6
helix-turn-helix transcriptional regulatorKR52_RS11220Not AvailablePositive2184820 - 218580035052.9
gh116 family glycosyl hydrolaseKR52_RS11225Not AvailableNegative2185719 - 218821791679.6
hypothetical proteinKR52_RS11230Not AvailableNegative2188277 - 21885198887.42
sulfotransferaseKR52_RS11235Not AvailableNegative2188516 - 218958940099.0
bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferaseKR52_RS11240Not AvailablePositive2189622 - 219088144502.9
duf192 domain-containing proteinKR52_RS11245Not AvailableNegative2190889 - 219133216327.7
winged helix-turn-helix domain-containing proteinKR52_RS11250Not AvailableNegative2191339 - 219201624818.1
nad(+) kinaseKR52_RS11255Not AvailableNegative2192013 - 219292132768.5

Displaying genes 2361 – 2370 of 2776 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.