Synechococcus sp. KORDI-52 strain KORDI 52

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. KORDI-52 strain KORDI 52 is a Gram-negative cyanobacterium characterized by the presence of flagella, which may contribute to its motility. This strain has a single replicon, indicating a streamlined genomic organization that is typical for many cyanobacterial species. The genomic sequence of this strain is accessible under the accession number NZ_CP006271.1. Cyanobacteria, including Synechococcus sp. KORDI-52, are known for their photosynthetic capabilities and play a crucial role in aquatic ecosystems, contributing significantly to primary production and influencing nutrient cycling. The presence of flagella in this strain suggests an adaptation that may enhance its ability to navigate through varied aquatic environments, potentially aiding in the search for optimal light conditions and nutrient availability. Overall, the traits of Synechococcus sp. KORDI-52 highlight its adaptations as a freshwater cyanobacterium and its ecological importance in aquatic systems, where it can contribute to both the carbon and nitrogen cycles due to its photosynthetic and nitrogen-fixing abilities.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. KORDI-52
Strainstrain KORDI 52

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. KORDI-52 strain KORDI 52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. KORDI-52 strain KORDI 52 chromosome, complete

Gene Summary

Adenine Count

528371 bp

Thymine Count

523984 bp

Guanine Count

759146 bp

Cytosine Count

760568 bp

Genome Length

2572069 bp

Protein-coding Genes

2722 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf565 domain-containing proteinKR52_RS09115Not AvailableNegative1785387 - 178569811517.2
had-ia family hydrolaseKR52_RS09120Not AvailableNegative1785695 - 178647428095.4
single-stranded-dna-specific exonuclease recjKR52_RS09125Not AvailablePositive1786507 - 178840569102.9
photosystem ii reaction center protein ycf12/psb30KR52_RS09130Not AvailableNegative1788417 - 17885243808.89
ykgj family cysteine cluster proteinKR52_RS09135Not AvailablePositive1788633 - 178900713859.3
tmem165/gdt1 family proteinKR52_RS09140Not AvailablePositive1788997 - 178932911440.0
tmem165/gdt1 family proteinKR52_RS09145Not AvailablePositive1789332 - 178964910769.2
rnb domain-containing ribonucleaseKR52_RS09150Not AvailablePositive1789753 - 179207484241.2
flavin prenyltransferase ubixKR52_RS09155Not AvailablePositive1792078 - 179268622310.2
hypothetical proteinKR52_RS09160Not AvailablePositive1792683 - 179315616527.6

Displaying genes 1921 – 1930 of 2776 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.