Synechococcus sp. KORDI-52 strain KORDI 52

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. KORDI-52 strain KORDI 52 is a Gram-negative cyanobacterium characterized by the presence of flagella, which may contribute to its motility. This strain has a single replicon, indicating a streamlined genomic organization that is typical for many cyanobacterial species. The genomic sequence of this strain is accessible under the accession number NZ_CP006271.1. Cyanobacteria, including Synechococcus sp. KORDI-52, are known for their photosynthetic capabilities and play a crucial role in aquatic ecosystems, contributing significantly to primary production and influencing nutrient cycling. The presence of flagella in this strain suggests an adaptation that may enhance its ability to navigate through varied aquatic environments, potentially aiding in the search for optimal light conditions and nutrient availability. Overall, the traits of Synechococcus sp. KORDI-52 highlight its adaptations as a freshwater cyanobacterium and its ecological importance in aquatic systems, where it can contribute to both the carbon and nitrogen cycles due to its photosynthetic and nitrogen-fixing abilities.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. KORDI-52
Strainstrain KORDI 52

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. KORDI-52 strain KORDI 52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. KORDI-52 strain KORDI 52 chromosome, complete

Gene Summary

Adenine Count

528371 bp

Thymine Count

523984 bp

Guanine Count

759146 bp

Cytosine Count

760568 bp

Genome Length

2572069 bp

Protein-coding Genes

2722 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ahpc/tsa family proteinKR52_RS06420Not AvailablePositive1277109 - 127784026595.1
rhomboid family intramembrane serine proteaseKR52_RS06425Not AvailableNegative1277842 - 127838119486.3
nad(p)/fad-dependent oxidoreductaseKR52_RS06430Not AvailablePositive1278426 - 127996155245.4
hypothetical proteinKR52_RS06435Not AvailablePositive1280005 - 12802057687.27
duf6737 family proteinKR52_RS06440Not AvailableNegative1280271 - 128054610153.5
pcc domain-containing proteinKR52_RS06445Not AvailableNegative1280488 - 128109021260.5
ribbon-helix-helix domain-containing proteinKR52_RS06450Not AvailablePositive1281176 - 12814128382.03
transporter substrate-binding domain-containing proteinKR52_RS06455Not AvailableNegative1281422 - 128249538852.5
hypothetical proteinKR52_RS06460Not AvailableNegative1282583 - 12827626437.76
ligase-associated dna damage response endonuclease pdemKR52_RS06465Not AvailablePositive1282851 - 128352524838.9

Displaying genes 1341 – 1350 of 2776 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.