Synechococcus sp. KORDI-52 strain KORDI 52

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. KORDI-52 strain KORDI 52 is a Gram-negative cyanobacterium characterized by the presence of flagella, which may contribute to its motility. This strain has a single replicon, indicating a streamlined genomic organization that is typical for many cyanobacterial species. The genomic sequence of this strain is accessible under the accession number NZ_CP006271.1. Cyanobacteria, including Synechococcus sp. KORDI-52, are known for their photosynthetic capabilities and play a crucial role in aquatic ecosystems, contributing significantly to primary production and influencing nutrient cycling. The presence of flagella in this strain suggests an adaptation that may enhance its ability to navigate through varied aquatic environments, potentially aiding in the search for optimal light conditions and nutrient availability. Overall, the traits of Synechococcus sp. KORDI-52 highlight its adaptations as a freshwater cyanobacterium and its ecological importance in aquatic systems, where it can contribute to both the carbon and nitrogen cycles due to its photosynthetic and nitrogen-fixing abilities.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. KORDI-52
Strainstrain KORDI 52

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. KORDI-52 strain KORDI 52
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. KORDI-52 strain KORDI 52 chromosome, complete

Gene Summary

Adenine Count

528371 bp

Thymine Count

523984 bp

Guanine Count

759146 bp

Cytosine Count

760568 bp

Genome Length

2572069 bp

Protein-coding Genes

2722 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
photosystem ii s4 domain proteinKR52_RS05100Not AvailableNegative1018439 - 101921528748.3
hypothetical proteinKR52_RS05105Not AvailableNegative1019215 - 101971518193.3
phosphoglycerate dehydrogenaseKR52_RS05110Not AvailablePositive1019822 - 102140855980.8
50s ribosomal protein l11 methyltransferaseKR52_RS05115Not AvailablePositive1021408 - 102229532029.5
ferredoxinKR52_RS05120Not AvailablePositive1022451 - 102275010666.2
hypothetical proteinKR52_RS05125Not AvailablePositive1022853 - 102323914752.6
photosystem ii cytochrome c-550KR52_RS05130Not AvailableNegative1023279 - 102379118306.7
ribonuclease zKR52_RS05135Not AvailableNegative1023866 - 102482534761.5
spoiid/lytb domain-containing proteinKR52_RS05140Not AvailablePositive1024867 - 102631852090.1
glucosamine-6-phosphate deaminaseKR52_RS05145Not AvailablePositive1026278 - 102704527766.3

Displaying genes 1061 – 1070 of 2776 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.