Synechococcus sp. KORDI-100 strain KORDI 100

Gram-negative

Kingdom

Bacillati

Phylum

Cyanobacteriota

Class

Cyanophyceae

Order

Synechococcales

Family

Synechococcaceae

Genus

Synechococcus

Description

Synechococcus sp. KORDI-100 strain KORDI 100 is a Gram-negative cyanobacterium characterized by the presence of flagella, which may facilitate its motility in aquatic environments. This strain has a single replicon, indicating a streamlined genomic organization that could contribute to its adaptability and growth efficiency. The genetic material of Synechococcus sp. KORDI-100 is accessible under the accession number NZ_CP006269.1, allowing for further research and exploration of its genomic characteristics. The presence of flagella suggests that this strain may have a competitive advantage in nutrient acquisition or in colonizing specific ecological niches within its habitat. Cyanobacteria, including Synechococcus species, play a crucial role in aquatic ecosystems, particularly in carbon fixation and oxygen production through photosynthesis. The motility conferred by flagella may allow Synechococcus sp. KORDI-100 to respond dynamically to environmental changes, such as light availability and nutrient gradients. This ability to navigate its habitat could enhance its ecological success and impact on primary productivity in marine ecosystems. Overall, Synechococcus sp. KORDI-100 exemplifies the intricate adaptations of cyanobacteria that are vital for their survival and ecological function in diverse aquatic environments.

Taxonomy

KingdomBacillati
PhylumCyanobacteriota
ClassCyanophyceae
OrderSynechococcales
FamilySynechococcaceae
GenusSynechococcus
SpeciesSynechococcus sp. KORDI-100
Strainstrain KORDI 100

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Synechococcus sp. KORDI-100 strain KORDI 100
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Synechococcus sp. KORDI-100 strain KORDI 100 chromosome, complete

Gene Summary

Adenine Count

588881 bp

Thymine Count

596497 bp

Guanine Count

803539 bp

Cytosine Count

800083 bp

Genome Length

2789000 bp

Protein-coding Genes

2940 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
membrane protein insertion efficiency factor yiddKR100_RS05270Not AvailablePositive1050659 - 105093710226.6
glutaredoxin family proteinKR100_RS05275Not AvailablePositive1050941 - 105123710729.9
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseKR100_RS05280Not AvailablePositive1051272 - 105277753026.3
mechanosensitive ion channel family proteinKR100_RS05285Not AvailablePositive1052825 - 105393141751.8
cysteine--trna ligaseKR100_RS05290Not AvailableNegative1053932 - 105541954408.2
hypothetical proteinKR100_RS05295Not AvailablePositive1055769 - 105727152420.5
dna polymerase iKR100_RS05300Not AvailableNegative1057391 - 1060336106387.0
efflux rnd transporter periplasmic adaptor subunitKR100_RS05305Not AvailableNegative1060360 - 106153542651.7
redox-regulated atpase ychfKR100_RS05310Not AvailablePositive1061588 - 106267939513.9
hypothetical proteinKR100_RS05315Not AvailableNegative1062704 - 106381643539.2

Displaying genes 1101 – 1110 of 2990 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.