Bifidobacterium [indicum] DSM 20214 = LMG 11587

Gram-positiveRodAnaerobe

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium [indicum] DSM 20214 (also known as LMG 11587) is a gram-positive anaerobic bacterium characterized by its rod shape. This species is notable for its flagella presence, which is an unusual trait among bifidobacteria, typically known for their non-motility. B. indicum is classified under a single replicon, indicating it possesses one main chromosome, which is common among many bacteria. The strain is cataloged under the accession NZ_CP006018.1, which provides a reference for its genomic sequence and related studies. The anaerobic nature of Bifidobacterium [indicum] suggests it thrives in low-oxygen environments, typical of the gastrointestinal tract where it is often found. Bifidobacteria, in general, play a critical role in human gut health by contributing to the maintenance of gut flora, aiding in digestion, and potentially providing immune support. The presence of flagella in B. indicum may suggest adaptations that enhance its survival or colonization capabilities within the gut environment, though further studies would be required to clarify the functional implications of this trait. Understanding the specific ecological role of B. indicum within the gut microbiome can offer insights into its contributions to health and disease, particularly in the context of gut microbiota diversity and stability.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium coryneforme
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Bifidobacterium [indicum] DSM 20214 = LMG 11587
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium [indicum] DSM 20214 = LMG 11587 chromosome,

Gene Summary

Adenine Count

340498 bp

Thymine Count

344763 bp

Guanine Count

524777 bp

Cytosine Count

524508 bp

Genome Length

1734546 bp

Protein-coding Genes

1357 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydratase large subunitBINDI_RS01100Not AvailablePositive309750 - 31115350173.0
3-isopropylmalate dehydratase small subunitBINDI_RS01105Not AvailablePositive311203 - 31188926167.5
cpbp family intramembrane glutamic endopeptidaseBINDI_RS01110Not AvailablePositive311992 - 31295734547.4
type ii caax prenyl endopeptidase rce1 family proteinBINDI_RS07055Not AvailablePositive313085 - 316510117726.0
cpbp family intramembrane glutamic endopeptidaseBINDI_RS01125Not AvailablePositive316758 - 31771735289.6
udp-n-acetylglucosamine 1-carboxyvinyltransferaseBINDI_RS01130Not AvailablePositive317843 - 31917447782.6
1-acyl-sn-glycerol-3-phosphate acyltransferaseBINDI_RS01135Not AvailablePositive319257 - 32015033633.8
nad(p)h-dependent glycerol-3-phosphate dehydrogenaseBINDI_RS01140Not AvailablePositive320263 - 32126434498.4
d-alanine--d-alanine ligase family proteinBINDI_RS01145Not AvailablePositive321510 - 32267341116.4
mechanosensitive ion channel domain-containing proteinBINDI_RS01150Not AvailableNegative322762 - 32367632217.3

Displaying genes 221 – 230 of 1416 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.