Photobacterium gaetbulicola Gung47

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium gaetbulicola Gung47 is characterized by the presence of flagella, which suggests that it has the capability for motility. This feature may enable the organism to navigate through its aquatic environment, potentially influencing its interactions with other microorganisms and its ecological niche. The genome of Photobacterium gaetbulicola Gung47 is comprised of two replicons, indicating a complex genetic structure that may facilitate various metabolic and physiological functions. The two replicons can be advantageous for gene regulation and adaptability, allowing the organism to thrive in diverse environments. The organism is cataloged under the accession numbers NZ_CP005973.1 and NZ_CP005974.1, which provide a reference for its genomic data. These accessions can be used for further studies related to the genetic composition and functional attributes of the species. In summary, Photobacterium gaetbulicola Gung47 is a motile bacterium with a complex genomic architecture, characterized by its two replicons and flagellar presence. These traits are likely to play significant roles in its ecological interactions and adaptability within its marine habitat. Understanding its motility and genetic structure may provide insights into its ecological role and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium gaetbulicola
StrainGung47

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium gaetbulicola Gung47 chromosome 2, complete

Gene Summary

Adenine Count

952797 bp

Thymine Count

947701 bp

Guanine Count

976983 bp

Cytosine Count

979403 bp

Genome Length

3856884 bp

Protein-coding Genes

3349 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor p--(r)-beta-lysine ligaseH744_RS09085Not AvailableNegative70706 - 7167735949.0
fumarate reductase (quinol) flavoprotein subunitH744_RS09090Not AvailablePositive72227 - 7404166261.6
succinate dehydrogenase/fumarate reductase iron-sulfur subunitH744_RS09095Not AvailablePositive74041 - 7478127492.0
fumarate reductase subunit frdcH744_RS09100Not AvailablePositive74784 - 7516714552.5
fumarate reductase subunit frddH744_RS09105Not AvailablePositive75178 - 7554013096.4
spfh domain-containing proteinH744_RS09110Not AvailableNegative75606 - 7699752002.0
elongation factor pH744_RS09115Not AvailableNegative77194 - 7776020530.4
ef-p beta-lysylation protein epmbH744_RS09120Not AvailablePositive77794 - 7881638146.4
30s ribosomal protein s6--l-glutamate ligaseH744_RS09125Not AvailablePositive79433 - 8033532429.6
dehydrogenaseH744_RS09130Not AvailablePositive80437 - 8087115387.4

Displaying genes 71 – 80 of 5269 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003871glutathione amideC10H18N4O5SChemical structure of glutathione amideNot available
Average306.34Da
Monoisotopic306.09979087Da
BASm0003872glutathione amide disulfideC20H34N8O10S2Chemical structure of glutathione amide disulfideNot available
Average610.66Da
Monoisotopic610.183931675Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.