Celeribacter indicus strain P73

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Celeribacter

Description

Celeribacter indicus strain P73 is characterized as a Gram-negative, rod-shaped bacterium. This specific strain possesses a total of six replicons, indicating a complex genomic architecture which may contribute to its adaptability and metabolic versatility. The strain is associated with several genomic accessions, which are NZ_CP004393.1, NZ_CP004394.1, NZ_CP004396.1, NZ_CP004398.1, NZ_CP004397.1, and NZ_CP004395.1. These accessions provide a foundation for genomic studies, allowing for a deeper understanding of its genetic makeup and functional capabilities. The six replicons suggest that Celeribacter indicus strain P73 might possess multiple plasmids in addition to its chromosomal DNA. This characteristic can facilitate horizontal gene transfer, potentially enhancing its ability to adapt to various environmental conditions and to acquire new metabolic traits. The presence of multiple replicons is often associated with increased genetic plasticity, which may play a significant role in the bacterium's survival in diverse habitats. In an ecological context, the adaptability inferred from its genomic structure might allow Celeribacter indicus strain P73 to thrive in various environments, possibly including marine or sedimentary ecosystems. This adaptability could influence microbial community dynamics and nutrient cycling, underscoring the ecological importance of understanding such microorganisms in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusCeleribacter
SpeciesCeleribacter indicus
Strainstrain P73

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdeep-sea environments; deep-sea sediment
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Celeribacter indicus strain P73 plasmid pP73E, complete sequence.

Gene Summary

Adenine Count

1408 bp

Thymine Count

1437 bp

Guanine Count

2103 bp

Cytosine Count

2105 bp

Genome Length

7053 bp

Protein-coding Genes

9 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter permease subunitP73_RS13625Not AvailablePositive2698239 - 2701997135610.0
zinc ribbon domain-containing protein yjdmP73_RS13630Not AvailablePositive2702266 - 270260411883.2
trna dihydrouridine(20/20a) synthase dusaP73_RS13635Not AvailableNegative2702608 - 270354033836.8
site-specific integraseP73_RS13640Not AvailablePositive2703720 - 270479041220.6
spw repeat proteinP73_RS24445Not AvailableNegative2705229 - 270559112645.5
dna-directed rna polymerase subunit omegaP73_RS13650Not AvailableNegative2705622 - 27058618538.3
nadh dehydrogenase ubiquinone fe-s protein 4P73_RS25035Not AvailableNegative2705858 - 270658926476.1
hsp20 family proteinP73_RS13660Not AvailableNegative2706670 - 270716718404.7
hypothetical proteinP73_RS13665Not AvailablePositive2707380 - 27076047923.09
amylo-alpha-1,6-glucosidaseP73_RS13670Not AvailableNegative2707647 - 270985181713.7

Displaying genes 3201 – 3210 of 4926 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.