Burkholderia plantarii strain PG1

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia plantarii strain PG1 is a notable bacterium associated with Oryza sativa, commonly known as rice. This strain is recognized for its ability to cause significant health issues in rice plants, particularly manifesting as seedling blight and contributing to rice seed-borne diseases. The pathogenic nature of B. plantarii strain PG1 poses a risk to rice cultivation, which is a staple food for a large portion of the global population. One defining feature of strain PG1 is its motility, which may enhance its capacity to colonize and infect host plants. This mobility can facilitate the spread of the bacterium within rice crops, potentially leading to increased incidence of disease. The strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in agricultural environments. The accession number for this strain is NZ_CP002581.1, which provides a reference for further genetic and functional studies. Understanding the genetic makeup of B. plantarii strain PG1 is essential for developing effective management strategies to combat the diseases it causes. In terms of ecological insight, the presence of Burkholderia plantarii strain PG1 in rice systems highlights the complex interactions between pathogens and their hosts. The impact of this bacterium on rice health underlines the importance of monitoring and managing seed-borne diseases in agricultural practices to ensure sustainable rice production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia plantarii
Strainstrain PG1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia plantarii strain PG1 chromosome 2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorBGL_RS29235Not AvailableNegative2887247 - 288813432903.9
dmt family transporterBGL_RS29240Not AvailableNegative2888580 - 288944629421.4
atp-grasp domain-containing proteinBGL_RS29245Not AvailableNegative2889554 - 289077443588.8
rid family hydrolaseBGL_RS29250Not AvailableNegative2890853 - 289119412366.6
asparagine synthetase b family proteinBGL_RS29255Not AvailableNegative2891349 - 289288457880.5
3-phosphoshikimate 1-carboxyvinyltransferaseBGL_RS29260Not AvailableNegative2892921 - 289427648532.5
3-phosphoshikimate 1-carboxyvinyltransferaseBGL_RS29265Not AvailableNegative2894313 - 289561446723.4
abc transporter atp-binding proteinBGL_RS29270Not AvailablePositive2896784 - 289868568637.5
cpbp family intramembrane glutamic endopeptidaseBGL_RS29275Not AvailablePositive2899262 - 290023334161.6
voltage-gated chloride channel family proteinBGL_RS29280Not AvailableNegative2900539 - 290184344806.4

Displaying genes 2391 – 2400 of 3152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Seedling blightCausesPMC11524443
Rice seed-borne diseasesCausesPMC11524443
Rice seedling blightCausesPMC13130395

Displaying health effects 1 – 3 of 3 in total