Burkholderia plantarii strain PG1

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia plantarii strain PG1 is a notable bacterium associated with Oryza sativa, commonly known as rice. This strain is recognized for its ability to cause significant health issues in rice plants, particularly manifesting as seedling blight and contributing to rice seed-borne diseases. The pathogenic nature of B. plantarii strain PG1 poses a risk to rice cultivation, which is a staple food for a large portion of the global population. One defining feature of strain PG1 is its motility, which may enhance its capacity to colonize and infect host plants. This mobility can facilitate the spread of the bacterium within rice crops, potentially leading to increased incidence of disease. The strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in agricultural environments. The accession number for this strain is NZ_CP002581.1, which provides a reference for further genetic and functional studies. Understanding the genetic makeup of B. plantarii strain PG1 is essential for developing effective management strategies to combat the diseases it causes. In terms of ecological insight, the presence of Burkholderia plantarii strain PG1 in rice systems highlights the complex interactions between pathogens and their hosts. The impact of this bacterium on rice health underlines the importance of monitoring and managing seed-borne diseases in agricultural practices to ensure sustainable rice production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia plantarii
Strainstrain PG1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia plantarii strain PG1 chromosome 2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
undecaprenyl-phosphate galactose phosphotransferase wbapBGL_RS27390Not AvailableNegative2441229 - 244262051289.4
glucose-1-phosphate thymidylyltransferase rfbaBGL_RS27395Not AvailableNegative2442825 - 244370332542.2
glycosyltransferase family 2 proteinBGL_RS27400Not AvailableNegative2443790 - 244475234319.0
nad-dependent epimerase/dehydratase family proteinBGL_RS27405Not AvailableNegative2444776 - 244593042023.0
acyltransferaseBGL_RS27410Not AvailableNegative2445927 - 244657123409.3
glycosyltransferase family 2 proteinBGL_RS27415Not AvailableNegative2446568 - 244756036846.0
lipopolysaccharide biosynthesis proteinBGL_RS27420Not AvailableNegative2447571 - 244905853421.5
dtdp-4-dehydrorhamnose 3,5-epimeraseBGL_RS27425Not AvailableNegative2449254 - 244980520879.8
dtdp-glucose 4,6-dehydrataseBGL_RS27430Not AvailableNegative2449899 - 245096039253.6
polysaccharide biosynthesis tyrosine autokinaseBGL_RS27435Not AvailableNegative2451169 - 245347582311.4

Displaying genes 2001 – 2010 of 3152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Seedling blightCausesPMC11524443
Rice seed-borne diseasesCausesPMC11524443
Rice seedling blightCausesPMC13130395

Displaying health effects 1 – 3 of 3 in total