Burkholderia plantarii strain PG1

Motile

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia plantarii strain PG1 is a notable bacterium associated with Oryza sativa, commonly known as rice. This strain is recognized for its ability to cause significant health issues in rice plants, particularly manifesting as seedling blight and contributing to rice seed-borne diseases. The pathogenic nature of B. plantarii strain PG1 poses a risk to rice cultivation, which is a staple food for a large portion of the global population. One defining feature of strain PG1 is its motility, which may enhance its capacity to colonize and infect host plants. This mobility can facilitate the spread of the bacterium within rice crops, potentially leading to increased incidence of disease. The strain possesses a single replicon, indicating a streamlined genetic structure that may be advantageous for its adaptability and survival in agricultural environments. The accession number for this strain is NZ_CP002581.1, which provides a reference for further genetic and functional studies. Understanding the genetic makeup of B. plantarii strain PG1 is essential for developing effective management strategies to combat the diseases it causes. In terms of ecological insight, the presence of Burkholderia plantarii strain PG1 in rice systems highlights the complex interactions between pathogens and their hosts. The impact of this bacterium on rice health underlines the importance of monitoring and managing seed-borne diseases in agricultural practices to ensure sustainable rice production.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia plantarii
Strainstrain PG1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityYes
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia plantarii strain PG1 chromosome 2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alpha/beta fold hydrolaseBGL_RS23445Not AvailablePositive1377424 - 137843735555.8
autotransporter outer membrane beta-barrel domain-containing proteinBGL_RS23450Not AvailablePositive1378603 - 138084373396.1
autotransporter strand-loop-strand o-heptosyltransferaseBGL_RS23455Not AvailablePositive1380833 - 138227853333.6
oxidoreductase-like domain-containing proteinBGL_RS23460Not AvailablePositive1382359 - 13825838063.18
arabinofuranosidase catalytic domain-containing proteinBGL_RS23465Not AvailableNegative1382658 - 138474570861.2
laci family dna-binding transcriptional regulatorBGL_RS23470Not AvailablePositive1385803 - 138684337329.7
cation diffusion facilitator family transporterBGL_RS23475Not AvailableNegative1386893 - 138756123381.9
s8 family peptidaseBGL_RS23480Not AvailableNegative1387886 - 138963457846.7
4-hydroxy-2-oxoheptanedioate aldolaseBGL_RS23485Not AvailablePositive1390258 - 139105227630.1
isl3 family transposaseBGL_RS23490Not AvailableNegative1391301 - 139252147499.8

Displaying genes 1161 – 1170 of 3152 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Seedling blightCausesPMC11524443
Rice seed-borne diseasesCausesPMC11524443
Rice seedling blightCausesPMC13130395

Displaying health effects 1 – 3 of 3 in total