Sphingopyxis lindanitolerans strain WS5A3p

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis lindanitolerans strain WS5A3p is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and survival in varied environments. The genomic information for this strain is cataloged under the accession number NZ_CM009578.1, providing a reference point for researchers interested in its genetic and functional attributes. The rod shape of Sphingopyxis lindanitolerans strain WS5A3p may play a role in its ecological niche, potentially influencing its motility and interaction with surrounding microbial communities. This morphological trait is often associated with efficient nutrient uptake and colonization abilities in diverse environments, from soil to aquatic systems. Understanding the characteristics of Sphingopyxis lindanitolerans strain WS5A3p enriches our knowledge of microbial diversity and the functional roles such bacteria may serve in their ecosystems. Given its potential adaptability, this strain could contribute to biogeochemical cycles or play a role in bioremediation processes, highlighting the ecological significance of rod-shaped bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis lindanitolerans
Strainstrain WS5A3p

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis lindanitolerans strain WS5A3p chromosome, whole

Gene Summary

Adenine Count

720053 bp

Thymine Count

720958 bp

Guanine Count

1348533 bp

Cytosine Count

1359682 bp

Genome Length

4149534 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii toxin-antitoxin system vapc family toxinCVO77_RS04580Not AvailableNegative958586 - 95894812831.6
type ii toxin-antitoxin system vapb family antitoxinCVO77_RS21570Not AvailableNegative958945 - 95940917412.4
sulfite exporter taue/safe family proteinCVO77_RS04590Not AvailableNegative959480 - 96023826090.5
threonine--trna ligaseCVO77_RS04595Not AvailableNegative960235 - 96224175530.8
hypothetical proteinCVO77_RS04600Not AvailablePositive962428 - 96302421359.8
helix-turn-helix transcriptional regulatorCVO77_RS04605Not AvailablePositive963021 - 9632127202.7
alpha/beta fold hydrolaseCVO77_RS04610Not AvailablePositive963217 - 96413132079.1
duf6356 family proteinCVO77_RS04615Not AvailablePositive964210 - 9644649351.56
alpha/beta fold hydrolaseCVO77_RS04620Not AvailablePositive964470 - 96522826578.8
acyl-coa thioesteraseCVO77_RS04625Not AvailablePositive965238 - 96567516754.9

Displaying genes 941 – 950 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.