Sphingopyxis lindanitolerans strain WS5A3p

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis lindanitolerans strain WS5A3p is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and survival in varied environments. The genomic information for this strain is cataloged under the accession number NZ_CM009578.1, providing a reference point for researchers interested in its genetic and functional attributes. The rod shape of Sphingopyxis lindanitolerans strain WS5A3p may play a role in its ecological niche, potentially influencing its motility and interaction with surrounding microbial communities. This morphological trait is often associated with efficient nutrient uptake and colonization abilities in diverse environments, from soil to aquatic systems. Understanding the characteristics of Sphingopyxis lindanitolerans strain WS5A3p enriches our knowledge of microbial diversity and the functional roles such bacteria may serve in their ecosystems. Given its potential adaptability, this strain could contribute to biogeochemical cycles or play a role in bioremediation processes, highlighting the ecological significance of rod-shaped bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis lindanitolerans
Strainstrain WS5A3p

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis lindanitolerans strain WS5A3p chromosome, whole

Gene Summary

Adenine Count

720053 bp

Thymine Count

720958 bp

Guanine Count

1348533 bp

Cytosine Count

1359682 bp

Genome Length

4149534 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcription elongation factor greaCVO77_RS18310Not AvailablePositive3869643 - 387011917348.5
rhomboid family intramembrane serine proteaseCVO77_RS18315Not AvailablePositive3870137 - 387077221999.8
nudix hydrolaseCVO77_RS18320Not AvailableNegative3870809 - 387135419652.4
tpm domain-containing proteinCVO77_RS18325Not AvailableNegative3871364 - 387204424487.7
tpm domain-containing proteinCVO77_RS18330Not AvailableNegative3872057 - 387287828539.7
tpm domain-containing proteinCVO77_RS18335Not AvailableNegative3872875 - 387339918163.8
lema family proteinCVO77_RS18340Not AvailableNegative3873401 - 387400321547.8
large conductance mechanosensitive channel protein msclCVO77_RS18345Not AvailablePositive3874121 - 387453714821.5
Tmrna,resume consensus sequence (at 213): aataggtgctaacgataaNot AvailableNot AvailablePositive3874622 - 3874967Not Available
merr family transcriptional regulatorCVO77_RS18355Not AvailableNegative3875089 - 387549915097.8

Displaying genes 3691 – 3700 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.