Sphingopyxis lindanitolerans strain WS5A3p

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis lindanitolerans strain WS5A3p is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and survival in varied environments. The genomic information for this strain is cataloged under the accession number NZ_CM009578.1, providing a reference point for researchers interested in its genetic and functional attributes. The rod shape of Sphingopyxis lindanitolerans strain WS5A3p may play a role in its ecological niche, potentially influencing its motility and interaction with surrounding microbial communities. This morphological trait is often associated with efficient nutrient uptake and colonization abilities in diverse environments, from soil to aquatic systems. Understanding the characteristics of Sphingopyxis lindanitolerans strain WS5A3p enriches our knowledge of microbial diversity and the functional roles such bacteria may serve in their ecosystems. Given its potential adaptability, this strain could contribute to biogeochemical cycles or play a role in bioremediation processes, highlighting the ecological significance of rod-shaped bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis lindanitolerans
Strainstrain WS5A3p

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis lindanitolerans strain WS5A3p chromosome, whole

Gene Summary

Adenine Count

720053 bp

Thymine Count

720958 bp

Guanine Count

1348533 bp

Cytosine Count

1359682 bp

Genome Length

4149534 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
porphobilinogen synthaseCVO77_RS13995Not AvailablePositive2913998 - 291499635500.2
spermidine synthaseCVO77_RS14000Not AvailablePositive2914996 - 291724881136.8
gamma carbonic anhydrase family proteinCVO77_RS14005Not AvailablePositive2917245 - 291779919555.8
inner membrane-spanning protein ycibCVO77_RS14010Not AvailableNegative2917832 - 291848823822.8
signal recognition particle-docking protein ftsyCVO77_RS14015Not AvailableNegative2918485 - 291941132619.6
miab/rimo family radical sam methylthiotransferaseCVO77_RS14020Not AvailableNegative2919408 - 292070045644.6
diaminopimelate epimeraseCVO77_RS14025Not AvailableNegative2920697 - 292150328350.1
putative bifunctional diguanylate cyclase/phosphodiesteraseCVO77_RS14030Not AvailableNegative2921600 - 292322559086.2
signal recognition particle proteinCVO77_RS14035Not AvailablePositive2923470 - 292492150926.8
catalaseCVO77_RS14040Not AvailablePositive2924958 - 292541916613.3

Displaying genes 2821 – 2830 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.