Sphingopyxis lindanitolerans strain WS5A3p

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis lindanitolerans strain WS5A3p is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and survival in varied environments. The genomic information for this strain is cataloged under the accession number NZ_CM009578.1, providing a reference point for researchers interested in its genetic and functional attributes. The rod shape of Sphingopyxis lindanitolerans strain WS5A3p may play a role in its ecological niche, potentially influencing its motility and interaction with surrounding microbial communities. This morphological trait is often associated with efficient nutrient uptake and colonization abilities in diverse environments, from soil to aquatic systems. Understanding the characteristics of Sphingopyxis lindanitolerans strain WS5A3p enriches our knowledge of microbial diversity and the functional roles such bacteria may serve in their ecosystems. Given its potential adaptability, this strain could contribute to biogeochemical cycles or play a role in bioremediation processes, highlighting the ecological significance of rod-shaped bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis lindanitolerans
Strainstrain WS5A3p

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis lindanitolerans strain WS5A3p chromosome, whole

Gene Summary

Adenine Count

720053 bp

Thymine Count

720958 bp

Guanine Count

1348533 bp

Cytosine Count

1359682 bp

Genome Length

4149534 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l28CVO77_RS13285Not AvailableNegative2760861 - 276115410526.8
trna adenosine(34) deaminase tadaCVO77_RS13290Not AvailablePositive2761295 - 276175016188.4
4-hydroxy-tetrahydrodipicolinate reductaseCVO77_RS13295Not AvailablePositive2761841 - 276256625080.2
m48 family metallopeptidaseCVO77_RS13300Not AvailablePositive2762595 - 276377343088.5
endonuclease iiiCVO77_RS13305Not AvailablePositive2763770 - 276442624135.4
m20/m25/m40 family metallo-hydrolaseCVO77_RS13315Not AvailablePositive2764773 - 276614647497.8
tetr/acrr family transcriptional regulatorCVO77_RS13320Not AvailableNegative2766273 - 276686620487.3
aromatic ring-hydroxylating oxygenase subunit alphaCVO77_RS13325Not AvailablePositive2766900 - 276807844680.1
fad-dependent oxidoreductaseCVO77_RS13330Not AvailablePositive2768191 - 276940843422.2
phytoene desaturase family proteinCVO77_RS13335Not AvailablePositive2769405 - 277102457800.5

Displaying genes 2681 – 2690 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.