Sphingopyxis lindanitolerans strain WS5A3p

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingopyxidaceae

Genus

Sphingopyxis

Description

Sphingopyxis lindanitolerans strain WS5A3p is characterized as a rod-shaped bacterium. This strain possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptability and survival in varied environments. The genomic information for this strain is cataloged under the accession number NZ_CM009578.1, providing a reference point for researchers interested in its genetic and functional attributes. The rod shape of Sphingopyxis lindanitolerans strain WS5A3p may play a role in its ecological niche, potentially influencing its motility and interaction with surrounding microbial communities. This morphological trait is often associated with efficient nutrient uptake and colonization abilities in diverse environments, from soil to aquatic systems. Understanding the characteristics of Sphingopyxis lindanitolerans strain WS5A3p enriches our knowledge of microbial diversity and the functional roles such bacteria may serve in their ecosystems. Given its potential adaptability, this strain could contribute to biogeochemical cycles or play a role in bioremediation processes, highlighting the ecological significance of rod-shaped bacteria in various habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingopyxidaceae
GenusSphingopyxis
SpeciesSphingopyxis lindanitolerans
Strainstrain WS5A3p

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingopyxis lindanitolerans strain WS5A3p chromosome, whole

Gene Summary

Adenine Count

720053 bp

Thymine Count

720958 bp

Guanine Count

1348533 bp

Cytosine Count

1359682 bp

Genome Length

4149534 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
class i sam-dependent methyltransferaseCVO77_RS12785Not AvailableNegative2657484 - 265816124723.9
helix-turn-helix domain-containing proteinCVO77_RS12790Not AvailableNegative2658298 - 265902325128.0
copper homeostasis membrane protein copdCVO77_RS12795Not AvailableNegative2659020 - 266002734924.0
copper homeostasis periplasmic binding protein copcCVO77_RS12800Not AvailableNegative2659978 - 266036113351.5
hypothetical proteinCVO77_RS12805Not AvailablePositive2660505 - 26607718994.06
periplasmic heavy metal sensorCVO77_RS12810Not AvailablePositive2660774 - 266121115941.3
rna polymerase sigma factorCVO77_RS12815Not AvailablePositive2661208 - 266179221934.2
copper resistance system multicopper oxidaseCVO77_RS12820Not AvailablePositive2661904 - 266375167148.6
copper resistance protein bCVO77_RS12825Not AvailablePositive2663748 - 266494442727.2
duf305 domain-containing proteinCVO77_RS12830Not AvailablePositive2665037 - 266542614489.5

Displaying genes 2581 – 2590 of 3955 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.