Psychrobacter sp. 4Dc

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. 4Dc is a psychrophilic bacterium known for its adaptability to cold environments. A notable characteristic of this species is the presence of flagella, which aids in motility and may contribute to its survival in diverse ecological niches. The organism possesses a complex genetic structure indicated by the presence of four replicons, suggesting a potential for genetic diversity and adaptability. The genomic data for Psychrobacter sp. 4Dc is represented in several accession numbers: NZ_CM009115.1, NZ_CM009116.1, NZ_CM009117.1, and PJAT00000000.1. These accessions provide a framework for studying its genetic makeup and understanding the functional capabilities of this bacterium in various environments. Psychrobacter species are often found in polar regions, deep-sea environments, and other cold ecosystems, where they play significant roles in nutrient cycling. The flagella's presence indicates that Psychrobacter sp. 4Dc can navigate through its aquatic habitat, potentially influencing the distribution of organic matter and other microorganisms. This motility may also enhance its ability to colonize surfaces and utilize available resources efficiently. In summary, Psychrobacter sp. 4Dc exhibits traits that not only highlight its adaptability to cold environments but also underscore its ecological role in nutrient cycling and microbial community dynamics in extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. 4Dc
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. 4Dc contig59, whole genome shotgun sequence.

Gene Summary

Adenine Count

944329 bp

Thymine Count

948927 bp

Guanine Count

707707 bp

Cytosine Count

707613 bp

Genome Length

3308576 bp

Protein-coding Genes

144 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
copper-transporting p-type atpaseCXF61_RS00200Not AvailableNegative39478 - 4208792618.3
hypothetical proteinCXF61_RS00205Not AvailableNegative42226 - 423815853.79
duf5676 family membrane proteinCXF61_RS14075Not AvailableNegative42480 - 4275810550.1
methyltransferase family proteinCXF61_RS00210Not AvailableNegative42871 - 4352424973.6
apc family permeaseCXF61_RS00215Not AvailableNegative43654 - 4500348081.8
duf305 domain-containing proteinCXF61_RS00220Not AvailableNegative45143 - 4561918541.9
copper resistance protein bCXF61_RS00225Not AvailableNegative45715 - 4682740695.6
copper resistance system multicopper oxidaseCXF61_RS00230Not AvailableNegative46859 - 4855663814.8
duf411 domain-containing proteinCXF61_RS00235Not AvailableNegative48624 - 4926222702.7
c-type cytochromeCXF61_RS00240Not AvailableNegative49432 - 5002221410.5

Displaying genes 241 – 250 of 259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.