Psychrobacter sp. 4Dc

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Moraxellales

Family

Moraxellaceae

Genus

Psychrobacter

Description

Psychrobacter sp. 4Dc is a psychrophilic bacterium known for its adaptability to cold environments. A notable characteristic of this species is the presence of flagella, which aids in motility and may contribute to its survival in diverse ecological niches. The organism possesses a complex genetic structure indicated by the presence of four replicons, suggesting a potential for genetic diversity and adaptability. The genomic data for Psychrobacter sp. 4Dc is represented in several accession numbers: NZ_CM009115.1, NZ_CM009116.1, NZ_CM009117.1, and PJAT00000000.1. These accessions provide a framework for studying its genetic makeup and understanding the functional capabilities of this bacterium in various environments. Psychrobacter species are often found in polar regions, deep-sea environments, and other cold ecosystems, where they play significant roles in nutrient cycling. The flagella's presence indicates that Psychrobacter sp. 4Dc can navigate through its aquatic habitat, potentially influencing the distribution of organic matter and other microorganisms. This motility may also enhance its ability to colonize surfaces and utilize available resources efficiently. In summary, Psychrobacter sp. 4Dc exhibits traits that not only highlight its adaptability to cold environments but also underscore its ecological role in nutrient cycling and microbial community dynamics in extreme habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderMoraxellales
FamilyMoraxellaceae
GenusPsychrobacter
SpeciesPsychrobacter sp. 4Dc
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Psychrobacter sp. 4Dc contig59, whole genome shotgun sequence.

Gene Summary

Adenine Count

944329 bp

Thymine Count

948927 bp

Guanine Count

707707 bp

Cytosine Count

707613 bp

Genome Length

3308576 bp

Protein-coding Genes

144 genes

Non-Coding Genes

48 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cd(ii)/pb(ii)-responsive transcriptional regulatorCXF61_RS00095Not AvailableNegative16883 - 1729315673.9
heavy metal translocating p-type atpaseCXF61_RS00100Not AvailablePositive17436 - 1965277395.8
heme lyase ccmf/nrfe family subunitCXF61_RS00105Not AvailablePositive19774 - 2182275320.3
dsbe family thiol:disulfide interchange proteinCXF61_RS00110Not AvailablePositive21829 - 2248524546.6
cytochrome c-type biogenesis proteinCXF61_RS00115Not AvailablePositive22482 - 2305121629.2
c-type cytochrome biogenesis protein ccmiCXF61_RS00120Not AvailablePositive23048 - 2432847158.8
signal peptidase iiCXF61_RS00125Not AvailablePositive24470 - 2517726040.0
duf3817 domain-containing proteinCXF61_RS00130Not AvailablePositive25423 - 2578513344.0
recombinase family proteinCXF61_RS00135Not AvailablePositive26344 - 2693722130.6
fic family proteinCXF61_RS00140Not AvailablePositive27247 - 2882759999.9

Displaying genes 221 – 230 of 259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.