Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nad(p)/fad-dependent oxidoreductaseHPDFL43_RS17215Not AvailablePositive3649318 - 365061947076.7
tartrate dehydrogenaseHPDFL43_RS17220Not AvailableNegative3650656 - 365172938756.5
lysr family transcriptional regulatorHPDFL43_RS17225Not AvailablePositive3651874 - 365278833226.5
atp-binding proteinHPDFL43_RS17230Not AvailablePositive3652991 - 365480865639.0
sigma-54-dependent transcriptional regulatorHPDFL43_RS17235Not AvailablePositive3654808 - 365614248886.1
taxi family trap transporter solute-binding subunitHPDFL43_RS17240Not AvailablePositive3656337 - 365731434043.3
trap transporter permeaseHPDFL43_RS17245Not AvailablePositive3657465 - 365975080071.6
alanine/glycine:cation symporter family proteinHPDFL43_RS17250Not AvailableNegative3659851 - 366140454400.8
universal stress proteinHPDFL43_RS17255Not AvailableNegative3661415 - 366185215584.7
winged helix-turn-helix transcriptional regulatorHPDFL43_RS17260Not AvailablePositive3662073 - 366254317626.6

Displaying genes 3481 – 3490 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.