Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphatase pap2 family proteinHPDFL43_RS16265Not AvailableNegative3445136 - 344607733581.8
pilus assembly protein tadg-related proteinHPDFL43_RS16275Not AvailableNegative3446531 - 344786546844.5
carbamoyl-phosphate synthase large subunitHPDFL43_RS16280Not AvailablePositive3448272 - 3451763125774.0
type ii toxin-antitoxin system hica family toxinHPDFL43_RS16285Not AvailablePositive3451775 - 34519697478.07
type ii toxin-antitoxin system hicb family antitoxinHPDFL43_RS16290Not AvailablePositive3451974 - 34522529641.21
duf2235 domain-containing proteinHPDFL43_RS16295Not AvailablePositive3452351 - 345359847201.5
nad(p)/fad-dependent oxidoreductaseHPDFL43_RS16300Not AvailableNegative3453618 - 345497948870.3
hypothetical proteinHPDFL43_RS16305Not AvailableNegative3455053 - 345541213013.7
endonuclease/exonuclease/phosphatase family proteinHPDFL43_RS16310Not AvailableNegative3455472 - 345651237743.6
transcription elongation factor greaHPDFL43_RS16315Not AvailablePositive3456787 - 345726317353.2

Displaying genes 3291 – 3300 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.