Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holo-acp synthaseHPDFL43_RS14640Not AvailableNegative3091759 - 309216014604.8
duf2062 domain-containing proteinHPDFL43_RS14645Not AvailableNegative3092157 - 309276822614.1
rela/spot family proteinHPDFL43_RS14650Not AvailableNegative3092976 - 309521683448.3
dna-directed rna polymerase subunit omegaHPDFL43_RS14655Not AvailableNegative3095351 - 309575214636.0
nyn domain-containing proteinHPDFL43_RS14660Not AvailablePositive3096104 - 309669422412.3
uracil-dna glycosylaseHPDFL43_RS14665Not AvailablePositive3096734 - 309737523319.8
ssra-binding protein smpbHPDFL43_RS14670Not AvailableNegative3097409 - 309789118639.4
4-hydroxy-tetrahydrodipicolinate synthaseHPDFL43_RS14675Not AvailableNegative3097894 - 309877530703.1
lytic transglycosylase domain-containing proteinHPDFL43_RS14680Not AvailablePositive3099180 - 310117472487.2
alpha/beta fold hydrolaseHPDFL43_RS14685Not AvailablePositive3101286 - 310221233318.0

Displaying genes 2971 – 2980 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.