Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna dihydrouridine synthase dusbHPDFL43_RS10455Not AvailablePositive2195846 - 219687436809.3
two-component system sensor histidine kinase ntrbHPDFL43_RS10460Not AvailablePositive2196871 - 219802841914.3
nitrogen regulation protein nr(i)HPDFL43_RS10465Not AvailablePositive2198042 - 219949353552.5
sensor histidine kinase ntry-likeHPDFL43_RS10470Not AvailablePositive2199654 - 220197584135.4
sigma-54-dependent transcriptional regulatorHPDFL43_RS10475Not AvailablePositive2201965 - 220332950365.8
trk system potassium transporter trkaHPDFL43_RS10480Not AvailablePositive2203389 - 220476550213.7
potassium transporter trkgHPDFL43_RS10485Not AvailablePositive2204803 - 220623950983.3
rna chaperone hfqHPDFL43_RS10490Not AvailablePositive2206522 - 22067709227.17
gtpase hflxHPDFL43_RS10495Not AvailablePositive2206868 - 220818448454.2
nucleoside triphosphate pyrophosphohydrolaseHPDFL43_RS10500Not AvailableNegative2208240 - 220906131012.6

Displaying genes 2131 – 2140 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.