Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent clp protease atp-binding subunit clpxHPDFL43_RS09050Not AvailablePositive1917204 - 191848446844.2
endopeptidase laHPDFL43_RS09055Not AvailablePositive1918918 - 192133588884.6
dna-binding protein hupbHPDFL43_RS09060Not AvailablePositive1921465 - 192179711708.0
dna polymerase iii subunit alphaHPDFL43_RS09065Not AvailablePositive1922387 - 1925956131375.0
dna polymerase ivHPDFL43_RS09070Not AvailableNegative1926272 - 192758848222.4
gnat family n-acetyltransferaseHPDFL43_RS09075Not AvailablePositive1927695 - 192827320832.1
hypothetical proteinHPDFL43_RS09080Not AvailableNegative1928315 - 192897123900.5
duf3572 domain-containing proteinHPDFL43_RS09085Not AvailableNegative1928968 - 19292349297.11
response regulatorHPDFL43_RS09090Not AvailablePositive1929451 - 192982213923.0
pled family two-component system response regulatorHPDFL43_RS09095Not AvailablePositive1929838 - 193121150187.4

Displaying genes 1851 – 1860 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.