Hoeflea phototrophica DFL-43

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Parahoeflea

Description

Hoeflea phototrophica DFL-43 is an aerobic, rod-shaped bacterium characterized by its mesophilic temperature range, with an optimal growth temperature of 32°C. This organism does not form spores, which is a notable trait in its life cycle and reproduction. The genetic information of Hoeflea phototrophica DFL-43 is encapsulated in a single replicon, indicating a relatively streamlined genomic structure. The accession number for its genetic sequence is NZ_CM002917.1, which provides a reference for researchers interested in its genetic and functional attributes. In terms of ecological context, the aerobic nature of Hoeflea phototrophica suggests its role in environments where oxygen is present, likely contributing to biogeochemical cycles in aquatic systems. Its mesophilic growth characteristics imply that it thrives in moderate temperature habitats, which are common in many ecosystems. Understanding the specific ecological niches occupied by Hoeflea phototrophica can enhance our comprehension of microbial diversity and function in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusParahoeflea
SpeciesParahoeflea phototrophica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hoeflea phototrophica DFL-43 chromosome, whole genome shotgun

Gene Summary

Adenine Count

909503 bp

Thymine Count

886316 bp

Guanine Count

1305669 bp

Cytosine Count

1366304 bp

Genome Length

4468465 bp

Protein-coding Genes

4082 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap transporter substrate-binding proteinHPDFL43_RS05705Not AvailablePositive1222710 - 122379538963.5
trap transporter small permease subunitHPDFL43_RS05710Not AvailablePositive1223863 - 122437518766.7
trap transporter large permeaseHPDFL43_RS05715Not AvailablePositive1224372 - 122592254085.8
nad-dependent succinate-semialdehyde dehydrogenaseHPDFL43_RS05720Not AvailableNegative1226047 - 122752552476.0
trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtabHPDFL43_RS05725Not AvailablePositive1227820 - 122869530443.5
alpha/beta fold hydrolaseHPDFL43_RS05730Not AvailableNegative1228776 - 122949826035.1
abc transporter permeaseHPDFL43_RS05735Not AvailableNegative1229495 - 123103655988.9
quaternary amine abc transporter atp-binding proteinHPDFL43_RS05740Not AvailableNegative1231033 - 123208838624.8
glycine betaine abc transporter substrate-binding proteinHPDFL43_RS05745Not AvailableNegative1232179 - 123313834868.8
d-cysteine desulfhydraseHPDFL43_RS05750Not AvailableNegative1233169 - 123426338507.2

Displaying genes 1251 – 1260 of 4229 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.