Treponema denticola AL-2

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema denticola AL-2 is a Gram-negative, anaerobic bacterium that belongs to the phylum Spirochaetes. It is characterized by its spiral shape (spirilla) and typically exists as single cells. T. denticola AL-2 is notable for its biotic relationship as a free-living organism, indicating it can thrive independently in its habitat, which is host-associated. This bacterium has a unique structure, possessing two membranes, which is characteristic of some Gram-negative bacteria. It has a single replicon, highlighting its simplicity in genomic organization. T. denticola AL-2 is mesophilic, with an optimal growth temperature of 30°C, although it can likely survive within a broader temperature range typical of mesophilic organisms. Interestingly, T. denticola AL-2 possesses flagella, which are often associated with motility. However, it is noted that this organism does not exhibit mobility, suggesting that it may rely on other means of movement or positioning within its environment. The ecological role of T. denticola AL-2 may be significant, particularly in its interactions within host-associated environments. Its ability to thrive as a free-living organism suggests it may play a role in microbial communities associated with hosts, potentially influencing host health or disease dynamics. Further studies could elucidate its specific interactions and contributions to the microbiome of its associated hosts. The accession number for this strain is NZ_CM001798.1.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema denticola
StrainAL-2

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema denticola AL-2
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema denticola AL-2 chromosome, whole genome shotgun

Gene Summary

Adenine Count

877552 bp

Thymine Count

878245 bp

Guanine Count

541573 bp

Cytosine Count

535579 bp

Genome Length

2843090 bp

Protein-coding Genes

2581 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
apc family permeaseHMPREF9730_RS00760Not AvailableNegative131809 - 13318550277.8
s-methyl-5-thioribose-1-phosphate isomeraseHMPREF9730_RS00765Not AvailablePositive133404 - 13446238860.6
hypothetical proteinHMPREF9730_RS00770Not AvailableNegative134464 - 13536635219.6
ompl47-type beta-barrel domain-containing proteinHMPREF9730_RS00780Not AvailableNegative135505 - 13654537889.6
ompa family proteinHMPREF9730_RS00785Not AvailableNegative136585 - 13708819230.1
replicative dna helicaseHMPREF9730_RS00790Not AvailableNegative137172 - 13850949234.2
integrase catalytic domain-containing proteinHMPREF9730_RS00795Not AvailablePositive138658 - 13986046845.8
duf2141 domain-containing proteinHMPREF9730_RS00800Not AvailableNegative139940 - 14036816273.9
leucine-rich repeat domain-containing proteinHMPREF9730_RS00805Not AvailablePositive140554 - 145104164527.0
alanine--trna ligaseHMPREF9730_RS00810Not AvailablePositive145180 - 14698267109.0

Displaying genes 221 – 230 of 2685 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.